Problem rearding submitting job to cluster

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biodc172
Posts: 12
Joined: Sat May 07, 2022 2:59 am

Re: Problem rearding submitting job to cluster

Post by biodc172 »

Yvan Fournier wrote: Mon Aug 01, 2022 5:53 pm Hello,

I'll check the code. We have never encountered this issue, but I wonder whether it might be due to latency/delays in the filesystem operation leading to a directory not being empty yet. Not sure, just guessing, but I'll see if I can make the code more robust there.

In the meantime, as a workaround, you can use the advanced checkpoint/restart settings in the GUI so as to have only one checkpoint at the end of the computation. This should avoid going through the path that causes the error.

Best regards,

Yvan
Hi,

My cluster doesn't support GUI. I'm wondering if I could set the checkpoint/restart settings without GUI?

Best regards.
Yvan Fournier
Posts: 4070
Joined: Mon Feb 20, 2012 3:25 pm

Re: Problem rearding submitting job to cluster

Post by Yvan Fournier »

Hello,

Yes, you can do this in cs_user_parameter.c, calling the appropriate cs_restart... functions (not sure there are examples for this in the Doxyhen documentation, but the API is documented).

But a simpler solution is to use the GUI on a workstation and copy/sync the setuo.xml file on the cluster.

Regards,

Yvan
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