syrthes - transfer of mesh and result files

This forum is dedicated to Syrthes related issues, as the Syrthes tool does not have its own forum.
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kathi
Posts: 13
Joined: Tue Nov 04, 2014 11:04 am

syrthes - transfer of mesh and result files

Post by kathi » Mon Feb 06, 2017 6:19 pm

hello

there is no Syrthes forum, so I hope to get help here:

After installing Syrthes I don't find any tools for the transfer of mesh and result files, in particular from and back to .med or .rmed.

What we did:

(1)
in Ubuntu: sudo apt-get install syrthes
--> version 4.3 is installed. But there are no conversion tools
med-->syr and vice versa

(2)
on arbitrary Linux: Download syrthes version 4.1.1-dfsg1-5 from here:
https://directory.fsf.org/wiki/SYRTHES#tab=Overview
But when installing:
python syrthes_install.py
there is the message in the Shell:
--------------------------------------------------
Installation of SYRTHES
--------------------------------------------------
Architecture Name : Linux_x86_64
C compiler : gcc
C++ compiler : gcc
-----------------------------------------------------------
externe libraries : -
-----------------------------------------------------------
blas :
USE : no
INSTALL : no
hdf5 :
USE : yes
INSTALL : yes
med :
USE : yes
INSTALL : yes
mpi :
USE : no
INSTALL : no
metis :
USE : yes
INSTALL : yes
scotch :
USE : yes
INSTALL : yes
------------------------------
Traceback (most recent call last):
File "syrthes_install.py", line 1389, in <module>
main= Setup()
File "syrthes_install.py", line 157, in __init__
shutil.os.mkdir(self.libDestOpt )
OSError: [Errno 2] No such file or directory:
'/home/johannes/syrthes-4.1.1-dfsg1/extern-libraries/opt'

QUESTIONS
-------------------------------------

(a)
what can we do to resolve the installation problem of syrthes 4.1?

(b)
or: how can a conversion tool med-->syrthes and vice versa for
postprocessing be installed for the version 3.4 which is already
included in Ubuntu?

(c)
there is an interesting internet page with even a newer version 4.3 and
with Syrthes for Windows:

https://www.edf.fr/en/content/syrthes-0

But all the links are empty.
Does the Windows version and the newer version 4.3 exist and how could
we get it?

(d)
Just a supposition: is (perhaps) syrthes included if we make a full
installation of Code-Saturne? And also the converter from and back
syrtes-med included?

many thanks for you help

kathi

Luciano Garelli
Posts: 217
Joined: Fri Dec 04, 2015 1:42 pm

Re: syrthes - transfer of mesh and result files

Post by Luciano Garelli » Mon Feb 06, 2017 9:30 pm

Hello kathi,

The tool to convert a mesh created in salome (* .med) to a mesh to be used in Syrthes is "convert2syrthes4", and it is provided as a Syrthes tool. For the results file, inside of syrthes you have to go to "Running options" , "Advanced Options" , "Convert results fo software" and there you can choose : MED, Ensigth or no convertion.

You can download syrthes 4.3 from https://www.edf.fr/en/the-edf-group/wor ... ciel=10818.

Also you can find in the forum several pages with installation tips, like this http://code-saturne.org/forum/viewtopic.php?f=4&t=1465

Regards

Luciano

kathi
Posts: 13
Joined: Tue Nov 04, 2014 11:04 am

Re: syrthes - transfer of mesh and result files

Post by kathi » Tue Feb 07, 2017 11:44 pm

hello Luciano

thank you very much!! The conversion tool med -> syr work now very well, and I m very curious now to explore syrthes

best regards

kathi

junemo
Posts: 2
Joined: Thu Apr 06, 2017 8:04 pm

Re: syrthes - transfer of mesh and result files

Post by junemo » Fri Apr 07, 2017 5:42 pm

Hello all,

I found the "convert2syrthes4" does not work for the meshes in med format exported from salome versions newer than 7.8.
It seems due to the update of MED library.

Is there any way to handle this?

Will the newer version of syrthes come out to couple with the code_saturne 5.0?
;)
Sincerely,

Junemo

Yvan Fournier
Posts: 2689
Joined: Mon Feb 20, 2012 3:25 pm

Re: syrthes - transfer of mesh and result files

Post by Yvan Fournier » Fri Apr 07, 2017 10:50 pm

Hello,

There was no recent change in the coupling between Syrthes and Code_Saturne, so Syrthes versions 4.2 and above are compatible with Code_Saturne versions 4.0 and above. The new version of Syrthes should also remain compatible with Code_Saturne 5.0 (I do not know exactly when it should be released, though it should be ready at the latest for a released of Salome-CFD around September; Code_Saturne 5.0 should be released at the end of this month, as soon as the undergoing full validation process is finished).

If you rebuild the version of Syrthes you are using with MED 3.2, you should be able to read MED files from recent Salome versions. You can download MED 3.2 on the Salome web site, although the link may be hard to locate on the downloads page: http://files.salome-platform.org/Salome ... 2.1.tar.gz.

Best regards,

Yvan

junemo
Posts: 2
Joined: Thu Apr 06, 2017 8:04 pm

Re: syrthes - transfer of mesh and result files

Post by junemo » Sat Apr 08, 2017 5:06 am

Dear Yvan,

Thank you for the information.

Code_saturne Rocks!

Sincerely,
Yvan Fournier wrote:Hello,

There was no recent change in the coupling between Syrthes and Code_Saturne, so Syrthes versions 4.2 and above are compatible with Code_Saturne versions 4.0 and above. The new version of Syrthes should also remain compatible with Code_Saturne 5.0 (I do not know exactly when it should be released, though it should be ready at the latest for a released of Salome-CFD around September; Code_Saturne 5.0 should be released at the end of this month, as soon as the undergoing full validation process is finished).

If you rebuild the version of Syrthes you are using with MED 3.2, you should be able to read MED files from recent Salome versions. You can download MED 3.2 on the Salome web site, although the link may be hard to locate on the downloads page: http://files.salome-platform.org/Salome ... 2.1.tar.gz.

Best regards,

Yvan

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