This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by code_saturne configure 5.3.1, which was generated by GNU Autoconf 2.69. Invocation command line was $ /home/cs-chin1/SOFTWARE/Code_Saturne-5.3.1/code_saturne-5.3.1/configure --disable-mpi-io --disable-shared --disable-gui --with-hdf5=/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/hdf5 --without-cgns --enable-openmp --disable-mei --without-modules --with-med=/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/med --with-medcoupling=/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/MEDCOUPLING --prefix=/home/cs-chin1/SOFTWARE/Code_Saturne-5.3.1/code_saturne-5.3.1/arch/Linux --with-scotch=/home/cs-chin1/SOFTWARE/Scotch/scotch_6.0.3 CC=mpicc FC=mpif90 CCX=mpicxx ## --------- ## ## Platform. ## ## --------- ## hostname = login-e-15 uname -m = x86_64 uname -r = 3.10.0-862.14.4.el7.x86_64 uname -s = Linux uname -v = #1 SMP Tue Sep 25 14:32:52 CDT 2018 /usr/bin/uname -p = x86_64 /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /usr/local/software/slurm/current/sbin PATH: /usr/local/software/slurm/current/bin PATH: /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/bin PATH: /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/bin PATH: /usr/lib64/qt-3.3/bin PATH: /home/cs-chin1/perl5/bin PATH: /usr/local/bin PATH: /usr/bin PATH: /usr/local/sbin PATH: /usr/sbin PATH: /opt/dell/srvadmin/bin PATH: /home/cs-chin1/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:3416: checking build system type configure:3430: result: x86_64-pc-linux-gnu configure:3450: checking host system type configure:3463: result: x86_64-pc-linux-gnu configure:3483: checking target system type configure:3496: result: x86_64-pc-linux-gnu configure:3547: checking for a BSD-compatible install configure:3615: result: /usr/bin/install -c configure:3626: checking whether build environment is sane configure:3681: result: yes configure:3832: checking for a thread-safe mkdir -p configure:3871: result: /usr/bin/mkdir -p configure:3878: checking for gawk configure:3894: found /usr/bin/gawk configure:3905: result: gawk configure:3916: checking whether make sets $(MAKE) configure:3938: result: yes configure:3967: checking whether make supports nested variables configure:3984: result: yes configure:4063: checking how to create a pax tar archive configure:4074: tar --version tar (GNU tar) 1.26 Copyright (C) 2011 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later . This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law. Written by John Gilmore and Jay Fenlason. configure:4077: $? = 0 configure:4117: tardir=conftest.dir && eval tar --format=posix -chf - "$tardir" >conftest.tar configure:4120: $? = 0 configure:4124: tar -xf - &5 gcc (GCC) 5.4.0 Copyright (C) 2015 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:4852: $? = 0 configure:4841: mpicc -v >&5 Reading specs from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/specs COLLECT_GCC=/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/gcc COLLECT_LTO_WRAPPER=/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../libexec/gcc/x86_64-unknown-linux-gnu/5.4.0/lto-wrapper Target: x86_64-unknown-linux-gnu Configured with: /usr/local/software/spack/develop-290617/spack/var/spack/stage/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/gcc-5.4.0/configure --prefix=/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr --disable-multilib --enable-languages=all --with-mpfr=/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/mpfr-3.1.5-fgkq2iksdz2yoy7a757rtyytoyr3ujrb --with-gmp=/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gmp-6.1.2-5odxtlxihbfjtj4dxo52oz5f7r6ir6jk --enable-lto --with-quad --with-sysroot=/ --with-stage1-ldflags='-Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/lib -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/lib64 -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/mpc-1.0.3-m3teqofrgbjh5wejjvx26juitzg2v2o7/lib -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/isl-0.14-b4baqciurw3zba23msd2gloxhetmgqa5/lib -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gmp-6.1.2-5odxtlxihbfjtj4dxo52oz5f7r6ir6jk/lib -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/lib -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/mpfr-3.1.5-fgkq2iksdz2yoy7a757rtyytoyr3ujrb/lib -static-libstdc++ -static-libgcc' --with-boot-ldflags='-Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/lib -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/lib64 -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/mpc-1.0.3-m3teqofrgbjh5wejjvx26juitzg2v2o7/lib -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/isl-0.14-b4baqciurw3zba23msd2gloxhetmgqa5/lib -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gmp-6.1.2-5odxtlxihbfjtj4dxo52oz5f7r6ir6jk/lib -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/lib -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/mpfr-3.1.5-fgkq2iksdz2yoy7a757rtyytoyr3ujrb/lib -static-libstdc++ -static-libgcc' --with-gnu-ld --with-ld=/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/ld --with-gnu-as --with-as=/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/as --with-mpc=/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/mpc-1.0.3-m3teqofrgbjh5wejjvx26juitzg2v2o7 --with-isl=/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/isl-0.14-b4baqciurw3zba23msd2gloxhetmgqa5 Thread model: posix gcc version 5.4.0 (GCC) configure:4852: $? = 0 configure:4841: mpicc -V >&5 gcc: error: unrecognized command line option '-V' gcc: fatal error: no input files compilation terminated. configure:4852: $? = 1 configure:4841: mpicc -qversion >&5 gcc: error: unrecognized command line option '-qversion' gcc: fatal error: no input files compilation terminated. configure:4852: $? = 1 configure:4872: checking whether the C compiler works configure:4894: mpicc conftest.c >&5 configure:4898: $? = 0 configure:4946: result: yes configure:4949: checking for C compiler default output file name configure:4951: result: a.out configure:4957: checking for suffix of executables configure:4964: mpicc -o conftest conftest.c >&5 configure:4968: $? = 0 configure:4990: result: configure:5012: checking whether we are cross compiling configure:5020: mpicc -o conftest conftest.c >&5 configure:5024: $? = 0 configure:5031: ./conftest configure:5035: $? = 0 configure:5050: result: no configure:5055: checking for suffix of object files configure:5077: mpicc -c conftest.c >&5 configure:5081: $? = 0 configure:5102: result: o configure:5106: checking whether we are using the GNU C compiler configure:5125: mpicc -c conftest.c >&5 configure:5125: $? = 0 configure:5134: result: yes configure:5143: checking whether mpicc accepts -g configure:5163: mpicc -c -g conftest.c >&5 configure:5163: $? = 0 configure:5204: result: yes configure:5221: checking for mpicc option to accept ISO C89 configure:5284: mpicc -c -g -O2 conftest.c >&5 configure:5284: $? = 0 configure:5297: result: none needed configure:5322: checking whether mpicc understands -c and -o together configure:5344: mpicc -c conftest.c -o conftest2.o configure:5347: $? = 0 configure:5344: mpicc -c conftest.c -o conftest2.o configure:5347: $? = 0 configure:5359: result: yes configure:5387: checking for style of include used by make configure:5415: result: GNU configure:5441: checking dependency style of mpicc configure:5552: result: gcc3 configure:5625: checking for g++ configure:5641: found /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/bin/g++ configure:5652: result: g++ configure:5679: checking for C++ compiler version configure:5688: g++ --version >&5 g++ (GCC) 7.2.0 Copyright (C) 2017 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:5699: $? = 0 configure:5688: g++ -v >&5 Reading specs from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/bin/../lib/gcc/x86_64-pc-linux-gnu/7.2.0/specs COLLECT_GCC=g++ COLLECT_LTO_WRAPPER=/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/bin/../libexec/gcc/x86_64-pc-linux-gnu/7.2.0/lto-wrapper Target: x86_64-pc-linux-gnu Configured with: /usr/local/software/spack/develop-290617/spack/var/spack/stage/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/gcc-7.2.0/configure --prefix=/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt --disable-multilib --enable-languages=all --with-mpfr=/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/mpfr-3.1.5-fgkq2iksdz2yoy7a757rtyytoyr3ujrb --with-gmp=/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gmp-6.1.2-5odxtlxihbfjtj4dxo52oz5f7r6ir6jk --enable-lto --with-quad --with-system-zlib --with-mpc=/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/mpc-1.0.3-m3teqofrgbjh5wejjvx26juitzg2v2o7 --with-isl=/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/isl-0.18-3wslknueis6r2nx3tasaizgda2ianxfa Thread model: posix gcc version 7.2.0 (GCC) configure:5699: $? = 0 configure:5688: g++ -V >&5 g++: error: unrecognized command line option '-V' g++: fatal error: no input files compilation terminated. configure:5699: $? = 1 configure:5688: g++ -qversion >&5 g++: error: unrecognized command line option '-qversion'; did you mean '--version'? g++: fatal error: no input files compilation terminated. configure:5699: $? = 1 configure:5703: checking whether we are using the GNU C++ compiler configure:5722: g++ -c conftest.cpp >&5 configure:5722: $? = 0 configure:5731: result: yes configure:5740: checking whether g++ accepts -g configure:5760: g++ -c -g conftest.cpp >&5 configure:5760: $? = 0 configure:5801: result: yes configure:5826: checking dependency style of g++ configure:5937: result: gcc3 configure:6058: checking for Fortran compiler version configure:6067: mpif90 --version >&5 GNU Fortran (GCC) 5.4.0 Copyright (C) 2015 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:6078: $? = 0 configure:6067: mpif90 -v >&5 Reading specs from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/specs COLLECT_GCC=/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/gfortran COLLECT_LTO_WRAPPER=/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../libexec/gcc/x86_64-unknown-linux-gnu/5.4.0/lto-wrapper Target: x86_64-unknown-linux-gnu Configured with: /usr/local/software/spack/develop-290617/spack/var/spack/stage/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/gcc-5.4.0/configure --prefix=/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr --disable-multilib --enable-languages=all --with-mpfr=/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/mpfr-3.1.5-fgkq2iksdz2yoy7a757rtyytoyr3ujrb --with-gmp=/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gmp-6.1.2-5odxtlxihbfjtj4dxo52oz5f7r6ir6jk --enable-lto --with-quad --with-sysroot=/ --with-stage1-ldflags='-Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/lib -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/lib64 -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/mpc-1.0.3-m3teqofrgbjh5wejjvx26juitzg2v2o7/lib -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/isl-0.14-b4baqciurw3zba23msd2gloxhetmgqa5/lib -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gmp-6.1.2-5odxtlxihbfjtj4dxo52oz5f7r6ir6jk/lib -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/lib -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/mpfr-3.1.5-fgkq2iksdz2yoy7a757rtyytoyr3ujrb/lib -static-libstdc++ -static-libgcc' --with-boot-ldflags='-Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/lib -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/lib64 -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/mpc-1.0.3-m3teqofrgbjh5wejjvx26juitzg2v2o7/lib -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/isl-0.14-b4baqciurw3zba23msd2gloxhetmgqa5/lib -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gmp-6.1.2-5odxtlxihbfjtj4dxo52oz5f7r6ir6jk/lib -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/lib -Wl,-rpath,/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/mpfr-3.1.5-fgkq2iksdz2yoy7a757rtyytoyr3ujrb/lib -static-libstdc++ -static-libgcc' --with-gnu-ld --with-ld=/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/ld --with-gnu-as --with-as=/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/as --with-mpc=/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/mpc-1.0.3-m3teqofrgbjh5wejjvx26juitzg2v2o7 --with-isl=/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/isl-0.14-b4baqciurw3zba23msd2gloxhetmgqa5 Thread model: posix gcc version 5.4.0 (GCC) configure:6078: $? = 0 configure:6067: mpif90 -V >&5 gfortran: error: unrecognized command line option '-V' gfortran: fatal error: no input files compilation terminated. configure:6078: $? = 1 configure:6067: mpif90 -qversion >&5 gfortran: error: unrecognized command line option '-qversion' gfortran: fatal error: no input files compilation terminated. configure:6078: $? = 1 configure:6087: checking whether we are using the GNU Fortran compiler configure:6100: mpif90 -c conftest.F >&5 configure:6100: $? = 0 configure:6109: result: yes configure:6115: checking whether mpif90 accepts -g configure:6126: mpif90 -c -g conftest.f >&5 configure:6126: $? = 0 configure:6134: result: yes configure:6165: checking whether ln -s works configure:6169: result: yes configure:6177: checking for a sed that does not truncate output configure:6241: result: /usr/bin/sed configure:6312: checking for ar configure:6328: found /usr/bin/ar configure:6339: result: ar configure:6365: checking the archiver (ar) interface configure:6381: mpicc -c -g -O2 conftest.c >&5 configure:6381: $? = 0 configure:6383: ar cru libconftest.a conftest.o >&5 configure:6386: $? = 0 configure:6414: result: ar configure:6543: sourcing config/cs_auto_flags.sh (test for known compilers) configure:6702: checking how to print strings configure:6729: result: printf configure:6750: checking for a sed that does not truncate output configure:6814: result: /usr/bin/sed configure:6832: checking for grep that handles long lines and -e configure:6890: result: /usr/bin/grep configure:6895: checking for egrep configure:6957: result: /usr/bin/grep -E configure:6962: checking for fgrep configure:7024: result: /usr/bin/grep -F configure:7059: checking for ld used by mpicc configure:7126: result: /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/ld configure:7133: checking if the linker (/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/ld) is GNU ld configure:7148: result: yes configure:7160: checking for BSD- or MS-compatible name lister (nm) configure:7214: result: /usr/bin/nm -B configure:7344: checking the name lister (/usr/bin/nm -B) interface configure:7351: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 configure:7354: /usr/bin/nm -B "conftest.o" configure:7357: output 0000000000000000 B some_variable configure:7364: result: BSD nm configure:7368: checking the maximum length of command line arguments configure:7499: result: 3458764513820540925 configure:7547: checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format configure:7587: result: func_convert_file_noop configure:7594: checking how to convert x86_64-pc-linux-gnu file names to toolchain format configure:7614: result: func_convert_file_noop configure:7621: checking for /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/ld option to reload object files configure:7628: result: -r configure:7702: checking for objdump configure:7718: found /usr/bin/objdump configure:7729: result: objdump configure:7758: checking how to recognize dependent libraries configure:7958: result: pass_all configure:8043: checking for dlltool configure:8073: result: no configure:8100: checking how to associate runtime and link libraries configure:8127: result: printf %s\n configure:8251: checking for archiver @FILE support configure:8268: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:13:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:8268: $? = 0 configure:8271: ar cru libconftest.a @conftest.lst >&5 configure:8274: $? = 0 configure:8279: ar cru libconftest.a @conftest.lst >&5 ar: conftest.o: No such file or directory configure:8282: $? = 1 configure:8294: result: @ configure:8352: checking for strip configure:8368: found /usr/bin/strip configure:8379: result: strip configure:8451: checking for ranlib configure:8467: found /usr/bin/ranlib configure:8478: result: ranlib configure:8580: checking command to parse /usr/bin/nm -B output from mpicc object configure:8733: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:10:5: warning: function declaration isn't a prototype [-Wstrict-prototypes] int main(){nm_test_var='a';nm_test_func();return(0);} ^ configure:8736: $? = 0 configure:8740: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm configure:8743: $? = 0 configure:8809: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG -O conftest.c conftstm.o >&5 conftest.c:18:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] extern int nm_test_func(); ^ conftest.c:29:20: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] {"nm_test_func", (void *) &nm_test_func}, ^ configure:8812: $? = 0 configure:8850: result: ok configure:8897: checking for sysroot configure:8927: result: no configure:8934: checking for a working dd configure:8972: result: /usr/bin/dd configure:8976: checking how to truncate binary pipes configure:8991: result: /usr/bin/dd bs=4096 count=1 configure:9127: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 configure:9130: $? = 0 configure:9320: checking for mt configure:9336: found /usr/bin/mt configure:9347: result: mt configure:9370: checking if mt is a manifest tool configure:9376: mt '-?' usage: mt [-v] [--version] [-h] [ -f device ] command [ count ] configure:9384: result: no configure:10061: checking how to run the C preprocessor configure:10092: mpicc -E -D_POSIX_SOURCE -DNDEBUG conftest.c configure:10092: $? = 0 configure:10106: mpicc -E -D_POSIX_SOURCE -DNDEBUG conftest.c conftest.c:11:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:10106: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | /* end confdefs.h. */ | #include configure:10131: result: mpicc -E configure:10151: mpicc -E -D_POSIX_SOURCE -DNDEBUG conftest.c configure:10151: $? = 0 configure:10165: mpicc -E -D_POSIX_SOURCE -DNDEBUG conftest.c conftest.c:11:28: fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:10165: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | /* end confdefs.h. */ | #include configure:10194: checking for ANSI C header files configure:10214: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:17:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:10214: $? = 0 configure:10287: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG -O conftest.c >&5 conftest.c:23:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:10287: $? = 0 configure:10287: ./conftest configure:10287: $? = 0 configure:10298: result: yes configure:10311: checking for sys/types.h configure:10311: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 configure:10311: $? = 0 configure:10311: result: yes configure:10311: checking for sys/stat.h configure:10311: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 configure:10311: $? = 0 configure:10311: result: yes configure:10311: checking for stdlib.h configure:10311: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 configure:10311: $? = 0 configure:10311: result: yes configure:10311: checking for string.h configure:10311: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 configure:10311: $? = 0 configure:10311: result: yes configure:10311: checking for memory.h configure:10311: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 configure:10311: $? = 0 configure:10311: result: yes configure:10311: checking for strings.h configure:10311: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 configure:10311: $? = 0 configure:10311: result: yes configure:10311: checking for inttypes.h configure:10311: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 configure:10311: $? = 0 configure:10311: result: yes configure:10311: checking for stdint.h configure:10311: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 configure:10311: $? = 0 configure:10311: result: yes configure:10311: checking for unistd.h configure:10311: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 configure:10311: $? = 0 configure:10311: result: yes configure:10325: checking for dlfcn.h configure:10325: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 configure:10325: $? = 0 configure:10325: result: yes configure:10890: checking for objdir configure:10905: result: .libs configure:11169: checking if mpicc supports -fno-rtti -fno-exceptions configure:11187: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG -fno-rtti -fno-exceptions conftest.c >&5 cc1: warning: command line option '-fno-rtti' is valid for C++/ObjC++ but not for C configure:11191: $? = 0 configure:11204: result: no configure:11562: checking for mpicc option to produce PIC configure:11569: result: -fPIC -DPIC configure:11577: checking if mpicc PIC flag -fPIC -DPIC works configure:11595: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG -fPIC -DPIC -DPIC conftest.c >&5 configure:11599: $? = 0 configure:11612: result: yes configure:11641: checking if mpicc static flag -static works configure:11669: result: no configure:11684: checking if mpicc supports -c -o file.o configure:11705: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG -o out/conftest2.o conftest.c >&5 configure:11709: $? = 0 configure:11731: result: yes configure:11739: checking if mpicc supports -c -o file.o configure:11786: result: yes configure:11819: checking whether the mpicc linker (/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/ld -m elf_x86_64) supports shared libraries configure:13082: result: yes configure:13322: checking dynamic linker characteristics configure:13903: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG -O -Wl,-rpath -Wl,/foo conftest.c >&5 conftest.c:25:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:13903: $? = 0 configure:14152: result: GNU/Linux ld.so configure:14274: checking how to hardcode library paths into programs configure:14299: result: immediate configure:14847: checking whether stripping libraries is possible configure:14852: result: yes configure:14887: checking if libtool supports shared libraries configure:14889: result: yes configure:14892: checking whether to build shared libraries configure:14917: result: no configure:14920: checking whether to build static libraries configure:14924: result: yes configure:14947: checking how to run the C++ preprocessor configure:14974: g++ -E -D_POSIX_SOURCE -DNDEBUG conftest.cpp configure:14974: $? = 0 configure:14988: g++ -E -D_POSIX_SOURCE -DNDEBUG conftest.cpp conftest.cpp:23:10: fatal error: ac_nonexistent.h: No such file or directory #include ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:14988: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include configure:15013: result: g++ -E configure:15033: g++ -E -D_POSIX_SOURCE -DNDEBUG conftest.cpp configure:15033: $? = 0 configure:15047: g++ -E -D_POSIX_SOURCE -DNDEBUG conftest.cpp conftest.cpp:23:10: fatal error: ac_nonexistent.h: No such file or directory #include ^~~~~~~~~~~~~~~~~~ compilation terminated. configure:15047: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include configure:15209: checking for ld used by g++ configure:15276: result: /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/ld -m elf_x86_64 configure:15283: checking if the linker (/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/ld -m elf_x86_64) is GNU ld configure:15298: result: yes configure:15353: checking whether the g++ linker (/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/ld -m elf_x86_64) supports shared libraries configure:16426: result: yes configure:16462: g++ -c -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wunused -Wfloat-equal -Wmisleading-indentation -Wduplicated-cond -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.cpp >&5 configure:16465: $? = 0 configure:16946: checking for g++ option to produce PIC configure:16953: result: -fPIC -DPIC configure:16961: checking if g++ PIC flag -fPIC -DPIC works configure:16979: g++ -c -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wunused -Wfloat-equal -Wmisleading-indentation -Wduplicated-cond -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG -fPIC -DPIC -DPIC conftest.cpp >&5 configure:16983: $? = 0 configure:16996: result: yes configure:17019: checking if g++ static flag -static works configure:17047: result: yes configure:17059: checking if g++ supports -c -o file.o configure:17080: g++ -c -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wunused -Wfloat-equal -Wmisleading-indentation -Wduplicated-cond -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG -o out/conftest2.o conftest.cpp >&5 configure:17084: $? = 0 configure:17106: result: yes configure:17111: checking if g++ supports -c -o file.o configure:17158: result: yes configure:17188: checking whether the g++ linker (/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/ld -m elf_x86_64) supports shared libraries configure:17231: result: yes configure:17372: checking dynamic linker characteristics configure:18129: result: GNU/Linux ld.so configure:18194: checking how to hardcode library paths into programs configure:18219: result: immediate configure:18365: checking if libtool supports shared libraries configure:18367: result: yes configure:18370: checking whether to build shared libraries configure:18394: result: no configure:18397: checking whether to build static libraries configure:18401: result: yes configure:18435: mpif90 -c -x f95-cpp-input -Wall -pedantic-errors -std=f2003 -fdiagnostics-color=auto conftest.f >&5 configure:18438: $? = 0 configure:18898: checking for mpif90 option to produce PIC configure:18905: result: -fPIC configure:18913: checking if mpif90 PIC flag -fPIC works configure:18931: mpif90 -c -x f95-cpp-input -Wall -pedantic-errors -std=f2003 -fdiagnostics-color=auto -fPIC conftest.f >&5 configure:18935: $? = 0 configure:18948: result: yes configure:18971: checking if mpif90 static flag -static works configure:18999: result: no configure:19011: checking if mpif90 supports -c -o file.o configure:19032: mpif90 -c -x f95-cpp-input -Wall -pedantic-errors -std=f2003 -fdiagnostics-color=auto -o out/conftest2.o conftest.f >&5 configure:19036: $? = 0 configure:19058: result: yes configure:19063: checking if mpif90 supports -c -o file.o configure:19110: result: yes configure:19140: checking whether the mpif90 linker (/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/ld -m elf_x86_64) supports shared libraries configure:20353: result: yes configure:20494: checking dynamic linker characteristics configure:21245: result: GNU/Linux ld.so configure:21310: checking how to hardcode library paths into programs configure:21335: result: immediate configure:21441: checking for an ANSI C-conforming const configure:21507: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:25:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ conftest.c: In function 'main': conftest.c:46:9: warning: cast discards 'const' qualifier from pointer target type [-Wcast-qual] ppc = (char**) pcpcc; ^ configure:21507: $? = 0 configure:21514: result: yes configure:21522: checking for inline configure:21538: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:25:21: warning: function declaration isn't a prototype [-Wstrict-prototypes] static inline foo_t static_foo () {return 0; } ^ conftest.c:26:14: warning: function declaration isn't a prototype [-Wstrict-prototypes] inline foo_t foo () {return 0; } ^ configure:21538: $? = 0 configure:21546: result: inline configure:21564: checking for size_t configure:21564: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:57:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:21564: $? = 0 configure:21564: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:57:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ conftest.c: In function 'main': conftest.c:59:21: error: expected expression before ')' token if (sizeof ((size_t))) ^ configure:21564: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((size_t))) | return 0; | ; | return 0; | } configure:21564: result: yes configure:21575: checking for pid_t configure:21575: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:57:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:21575: $? = 0 configure:21575: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:57:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ conftest.c: In function 'main': conftest.c:59:20: error: expected expression before ')' token if (sizeof ((pid_t))) ^ configure:21575: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((pid_t))) | return 0; | ; | return 0; | } configure:21575: result: yes configure:21587: checking whether time.h and sys/time.h may both be included configure:21607: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:28:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:21607: $? = 0 configure:21614: result: yes configure:21622: checking for stdbool.h that conforms to C99 configure:21689: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:70:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ conftest.c: In function 'main': conftest.c:73:14: warning: the address of 's' will always evaluate as 'true' [-Waddress] bool e = &s; ^ conftest.c:77:22: warning: the address of 'a' will always evaluate as 'true' [-Waddress] return (!a + !b + !c + !d + !e + !f + !g + !h + !i + !!j + !k + !!l ^ conftest.c:77:27: warning: the address of 'b' will always evaluate as 'true' [-Waddress] return (!a + !b + !c + !d + !e + !f + !g + !h + !i + !!j + !k + !!l ^ conftest.c:77:32: warning: the address of 'c' will always evaluate as 'true' [-Waddress] return (!a + !b + !c + !d + !e + !f + !g + !h + !i + !!j + !k + !!l ^ conftest.c:77:37: warning: the address of 'd' will always evaluate as 'true' [-Waddress] return (!a + !b + !c + !d + !e + !f + !g + !h + !i + !!j + !k + !!l ^ conftest.c:77:47: warning: the address of 'f' will always evaluate as 'true' [-Waddress] return (!a + !b + !c + !d + !e + !f + !g + !h + !i + !!j + !k + !!l ^ conftest.c:77:52: warning: the address of 'g' will always evaluate as 'true' [-Waddress] return (!a + !b + !c + !d + !e + !f + !g + !h + !i + !!j + !k + !!l ^ conftest.c:77:57: warning: the address of 'h' will always evaluate as 'true' [-Waddress] return (!a + !b + !c + !d + !e + !f + !g + !h + !i + !!j + !k + !!l ^ conftest.c:77:62: warning: the address of 'i' will always evaluate as 'true' [-Waddress] return (!a + !b + !c + !d + !e + !f + !g + !h + !i + !!j + !k + !!l ^ conftest.c:78:29: warning: the address of 'n' will always evaluate as 'true' [-Waddress] ^ conftest.c:78:34: warning: the address of 'o' will always evaluate as 'true' [-Waddress] ^ conftest.c:78:39: warning: the address of 'p' will always evaluate as 'true' [-Waddress] ^ configure:21689: $? = 0 configure:21696: result: yes configure:21698: checking for _Bool configure:21698: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:58:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:21698: $? = 0 configure:21698: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:58:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ conftest.c: In function 'main': conftest.c:60:20: error: expected expression before ')' token if (sizeof ((_Bool))) ^ configure:21698: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((_Bool))) | return 0; | ; | return 0; | } configure:21698: result: yes configure:21716: checking for long long configure:21716: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:60:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:21716: $? = 0 configure:21716: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:60:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ conftest.c: In function 'main': conftest.c:62:24: error: expected expression before ')' token if (sizeof ((long long))) ^ configure:21716: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((long long))) | return 0; | ; | return 0; | } configure:21716: result: yes configure:21725: checking for unsigned long long configure:21725: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:61:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:21725: $? = 0 configure:21725: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:61:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ conftest.c: In function 'main': conftest.c:63:33: error: expected expression before ')' token if (sizeof ((unsigned long long))) ^ configure:21725: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_LONG_LONG 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((unsigned long long))) | return 0; | ; | return 0; | } configure:21725: result: yes configure:21735: checking for int32_t configure:21735: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:62:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:21735: $? = 0 configure:21735: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:62:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ conftest.c: In function 'main': conftest.c:64:22: error: expected expression before ')' token if (sizeof ((int32_t))) ^ configure:21735: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_LONG_LONG 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((int32_t))) | return 0; | ; | return 0; | } configure:21735: result: yes configure:21745: checking for int64_t configure:21745: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:63:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:21745: $? = 0 configure:21745: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:63:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ conftest.c: In function 'main': conftest.c:65:22: error: expected expression before ')' token if (sizeof ((int64_t))) ^ configure:21745: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_LONG_LONG 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_INT32_T 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((int64_t))) | return 0; | ; | return 0; | } configure:21745: result: yes configure:21755: checking for uint32_t configure:21755: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:64:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:21755: $? = 0 configure:21755: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:64:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ conftest.c: In function 'main': conftest.c:66:23: error: expected expression before ')' token if (sizeof ((uint32_t))) ^ configure:21755: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_LONG_LONG 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((uint32_t))) | return 0; | ; | return 0; | } configure:21755: result: yes configure:21765: checking for uint64_t configure:21765: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:65:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:21765: $? = 0 configure:21765: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:65:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ conftest.c: In function 'main': conftest.c:67:23: error: expected expression before ')' token if (sizeof ((uint64_t))) ^ configure:21765: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_LONG_LONG 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT32_T 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((uint64_t))) | return 0; | ; | return 0; | } configure:21765: result: yes configure:21775: checking for ptrdiff_t configure:21775: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:66:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:21775: $? = 0 configure:21775: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:66:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ conftest.c: In function 'main': conftest.c:68:24: error: expected expression before ')' token if (sizeof ((ptrdiff_t))) ^ configure:21775: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_LONG_LONG 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | int | main () | { | if (sizeof ((ptrdiff_t))) | return 0; | ; | return 0; | } configure:21775: result: yes configure:21790: checking size of void * configure:21795: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition conftest.c >&5 conftest.c:66:17: warning: function declaration isn't a prototype [-Wstrict-prototypes] static long int longval () { return (long int) (sizeof (void *)); } ^ conftest.c:67:26: warning: function declaration isn't a prototype [-Wstrict-prototypes] static unsigned long int ulongval () { return (long int) (sizeof (void *)); } ^ conftest.c:71:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:21795: $? = 0 configure:21795: ./conftest configure:21795: $? = 0 configure:21809: result: 8 configure:21823: checking size of short configure:21828: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition conftest.c >&5 conftest.c:67:17: warning: function declaration isn't a prototype [-Wstrict-prototypes] static long int longval () { return (long int) (sizeof (short)); } ^ conftest.c:68:26: warning: function declaration isn't a prototype [-Wstrict-prototypes] static unsigned long int ulongval () { return (long int) (sizeof (short)); } ^ conftest.c:72:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:21828: $? = 0 configure:21828: ./conftest configure:21828: $? = 0 configure:21842: result: 2 configure:21856: checking size of int configure:21861: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition conftest.c >&5 conftest.c:68:17: warning: function declaration isn't a prototype [-Wstrict-prototypes] static long int longval () { return (long int) (sizeof (int)); } ^ conftest.c:69:26: warning: function declaration isn't a prototype [-Wstrict-prototypes] static unsigned long int ulongval () { return (long int) (sizeof (int)); } ^ conftest.c:73:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:21861: $? = 0 configure:21861: ./conftest configure:21861: $? = 0 configure:21875: result: 4 configure:21889: checking size of long configure:21894: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition conftest.c >&5 conftest.c:69:17: warning: function declaration isn't a prototype [-Wstrict-prototypes] static long int longval () { return (long int) (sizeof (long)); } ^ conftest.c:70:26: warning: function declaration isn't a prototype [-Wstrict-prototypes] static unsigned long int ulongval () { return (long int) (sizeof (long)); } ^ conftest.c:74:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:21894: $? = 0 configure:21894: ./conftest configure:21894: $? = 0 configure:21908: result: 8 configure:21922: checking size of long long configure:21927: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition conftest.c >&5 conftest.c:70:17: warning: function declaration isn't a prototype [-Wstrict-prototypes] static long int longval () { return (long int) (sizeof (long long)); } ^ conftest.c:71:26: warning: function declaration isn't a prototype [-Wstrict-prototypes] static unsigned long int ulongval () { return (long int) (sizeof (long long)); } ^ conftest.c:75:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:21927: $? = 0 configure:21927: ./conftest configure:21927: $? = 0 configure:21941: result: 8 configure:21955: checking size of float configure:21960: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition conftest.c >&5 conftest.c:71:17: warning: function declaration isn't a prototype [-Wstrict-prototypes] static long int longval () { return (long int) (sizeof (float)); } ^ conftest.c:72:26: warning: function declaration isn't a prototype [-Wstrict-prototypes] static unsigned long int ulongval () { return (long int) (sizeof (float)); } ^ conftest.c:76:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:21960: $? = 0 configure:21960: ./conftest configure:21960: $? = 0 configure:21974: result: 4 configure:21988: checking size of double configure:21993: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition conftest.c >&5 conftest.c:72:17: warning: function declaration isn't a prototype [-Wstrict-prototypes] static long int longval () { return (long int) (sizeof (double)); } ^ conftest.c:73:26: warning: function declaration isn't a prototype [-Wstrict-prototypes] static unsigned long int ulongval () { return (long int) (sizeof (double)); } ^ conftest.c:77:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:21993: $? = 0 configure:21993: ./conftest configure:21993: $? = 0 configure:22007: result: 8 configure:22074: mpif90 -c -x f95-cpp-input -Wall -pedantic-errors -std=f2003 -fdiagnostics-color=auto conftest.f >&5 configure:22074: $? = 0 configure:22104: mpif90 -c -x f95-cpp-input -Wall -pedantic-errors -std=f2003 -fdiagnostics-color=auto -Itmpdir_0 conftest.f >&5 configure:22104: $? = 0 configure:22135: checking how to get verbose linking output from mpif90 configure:22145: mpif90 -c -x f95-cpp-input -Wall -pedantic-errors -std=f2003 -fdiagnostics-color=auto conftest.f >&5 configure:22145: $? = 0 configure:22163: mpif90 -o conftest -x f95-cpp-input -Wall -pedantic-errors -std=f2003 -fdiagnostics-color=auto -v -O -Wl,--allow-multiple-definition conftest.f Reading specs from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/specs Target: x86_64-unknown-linux-gnu Thread model: posix gcc version 5.4.0 (GCC) /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../libexec/gcc/x86_64-unknown-linux-gnu/5.4.0/f951 conftest.f -cpp=/tmp/cc6yhRaE.f90 -quiet -v -I /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/include -I /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/lib -iprefix /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/ -D_REENTRANT conftest.f -quiet -dumpbase conftest.f -mtune=generic -march=x86-64 -auxbase conftest -O -Wall -pedantic-errors -std=f2003 -version -fdiagnostics-color=auto -fintrinsic-modules-path /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/finclude -o /tmp/ccKs8IYA.s GNU Fortran (GCC) version 5.4.0 (x86_64-unknown-linux-gnu) compiled by GNU C version 5.4.0, GMP version 6.1.2, MPFR version 3.1.5-p2, MPC version 1.0.3 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/../../../../x86_64-unknown-linux-gnu/include" ignoring duplicate directory "/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/../../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/include" ignoring duplicate directory "/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/../../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/include-fixed" ignoring nonexistent directory "/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/../../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/../../../../x86_64-unknown-linux-gnu/include" ignoring duplicate directory "/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/include" #include "..." search starts here: #include <...> search starts here: /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/include /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/lib /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/finclude /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/include /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/include /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/include-fixed /usr/local/include /usr/include End of search list. GNU Fortran2003 (GCC) version 5.4.0 (x86_64-unknown-linux-gnu) compiled by GNU C version 5.4.0, GMP version 6.1.2, MPFR version 3.1.5-p2, MPC version 1.0.3 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/as -v -I /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/include -I /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/lib --64 -o /tmp/cccOd9Ox.o /tmp/ccKs8IYA.s GNU assembler version 2.28 (x86_64-pc-linux-gnu) using BFD version (GNU Binutils) 2.28 Reading specs from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib64/../lib64/libgfortran.spec rename spec lib to liborig /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../libexec/gcc/x86_64-unknown-linux-gnu/5.4.0/collect2 -plugin /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../libexec/gcc/x86_64-unknown-linux-gnu/5.4.0/liblto_plugin.so -plugin-opt=/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../libexec/gcc/x86_64-unknown-linux-gnu/5.4.0/lto-wrapper -plugin-opt=-fresolution=/tmp/cc4CJeIu.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lpthread -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --sysroot=/ -rpath /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/lib:/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/lib64 --eh-frame-hdr -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /lib/../lib64/crt1.o /lib/../lib64/crti.o /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/crtbegin.o -L/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/hwloc-1.11.7-ffzjos5nb56vx5la4tch7hwlpqdw3qng/lib -L/usr/lib64 -L/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/lib -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib64/../lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib/../lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/lib -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/../../.. --allow-multiple-definition /tmp/cccOd9Ox.o -rpath /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/hwloc-1.11.7-ffzjos5nb56vx5la4tch7hwlpqdw3qng/lib -rpath /usr/lib64 -rpath /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lpthread -lc -lgcc_s -lgcc /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/crtend.o /lib/../lib64/crtn.o configure:22246: result: -v configure:22248: checking for Fortran libraries of mpif90 configure:22271: mpif90 -o conftest -x f95-cpp-input -Wall -pedantic-errors -std=f2003 -fdiagnostics-color=auto -v -O -Wl,--allow-multiple-definition conftest.f Reading specs from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/specs Target: x86_64-unknown-linux-gnu Thread model: posix gcc version 5.4.0 (GCC) /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../libexec/gcc/x86_64-unknown-linux-gnu/5.4.0/f951 conftest.f -cpp=/tmp/cc0EaF9R.f90 -quiet -v -I /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/include -I /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/lib -iprefix /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/ -D_REENTRANT conftest.f -quiet -dumpbase conftest.f -mtune=generic -march=x86-64 -auxbase conftest -O -Wall -pedantic-errors -std=f2003 -version -fdiagnostics-color=auto -fintrinsic-modules-path /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/finclude -o /tmp/ccs4rHoP.s GNU Fortran (GCC) version 5.4.0 (x86_64-unknown-linux-gnu) compiled by GNU C version 5.4.0, GMP version 6.1.2, MPFR version 3.1.5-p2, MPC version 1.0.3 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 ignoring nonexistent directory "/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/../../../../x86_64-unknown-linux-gnu/include" ignoring duplicate directory "/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/../../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/include" ignoring duplicate directory "/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/../../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/include-fixed" ignoring nonexistent directory "/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/../../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/../../../../x86_64-unknown-linux-gnu/include" ignoring duplicate directory "/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/include" #include "..." search starts here: #include <...> search starts here: /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/include /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/lib /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/finclude /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/include /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/include /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/include-fixed /usr/local/include /usr/include End of search list. GNU Fortran2003 (GCC) version 5.4.0 (x86_64-unknown-linux-gnu) compiled by GNU C version 5.4.0, GMP version 6.1.2, MPFR version 3.1.5-p2, MPC version 1.0.3 GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/as -v -I /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/include -I /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/lib --64 -o /tmp/ccEQzlGM.o /tmp/ccs4rHoP.s GNU assembler version 2.28 (x86_64-pc-linux-gnu) using BFD version (GNU Binutils) 2.28 Reading specs from /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib64/../lib64/libgfortran.spec rename spec lib to liborig /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../libexec/gcc/x86_64-unknown-linux-gnu/5.4.0/collect2 -plugin /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../libexec/gcc/x86_64-unknown-linux-gnu/5.4.0/liblto_plugin.so -plugin-opt=/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../libexec/gcc/x86_64-unknown-linux-gnu/5.4.0/lto-wrapper -plugin-opt=-fresolution=/tmp/cca0JD0J.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lpthread -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --sysroot=/ -rpath /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/lib:/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/lib64 --eh-frame-hdr -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /lib/../lib64/crt1.o /lib/../lib64/crti.o /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/crtbegin.o -L/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/hwloc-1.11.7-ffzjos5nb56vx5la4tch7hwlpqdw3qng/lib -L/usr/lib64 -L/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/lib -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib64/../lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib/../lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/lib -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/../../.. --allow-multiple-definition /tmp/ccEQzlGM.o -rpath /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/hwloc-1.11.7-ffzjos5nb56vx5la4tch7hwlpqdw3qng/lib -rpath /usr/lib64 -rpath /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/lib -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lpthread -lc -lgcc_s -lgcc /usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/crtend.o /lib/../lib64/crtn.o configure:22467: result: -L/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/hwloc-1.11.7-ffzjos5nb56vx5la4tch7hwlpqdw3qng/lib -L/usr/lib64 -L/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/lib -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib64/../lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib/../lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/lib -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/../../.. -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath -lpthread configure:22519: checking for OpenMP (C) configure:22532: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c >&5 conftest.c:43:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:22532: $? = 0 configure:22539: result: yes configure:22542: checking for OpenMP simd configure:22559: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:43:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ conftest.c: In function 'main': conftest.c:45:8: warning: variable 'a' set but not used [-Wunused-but-set-variable] double a[128]; ^ configure:22559: $? = 0 configure:22565: result: yes configure:22572: checking for OpenMP (Fortran) configure:22582: mpif90 -o conftest -x f95-cpp-input -Wall -pedantic-errors -std=f2003 -fdiagnostics-color=auto -fopenmp -O -Wl,--allow-multiple-definition -fopenmp conftest.f >&5 conftest.f:4:10: n = omp_get_num_threads() 1 Warning: Possible change of value in conversion from REAL(4) to INTEGER(4) at (1) [-Wconversion] configure:22582: $? = 0 configure:22589: result: yes configure:22627: checking how to get verbose linking output from mpif90 configure:22738: result: -v configure:22740: checking for Fortran libraries of mpif90 configure:22959: result: -L/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/hwloc-1.11.7-ffzjos5nb56vx5la4tch7hwlpqdw3qng/lib -L/usr/lib64 -L/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/lib -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib64/../lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib/../lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/lib -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/../../.. -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath -lpthread configure:23012: checking for a Python interpreter with version >= "2.6" configure:23029: python -c import sys # split strings by '.' and convert to numeric. Append some zeros # because we need at least 4 digits for the hex conversion. # map returns an iterator in Python 3.0 and a list in 2.x minver = list(map(int, '2.6'.split('.'))) + [0, 0, 0] minverhex = 0 # xrange is not present in Python 3.0 and range returns an iterator for i in list(range(0, 4)): minverhex = (minverhex << 8) + minver[i] sys.exit(sys.hexversion < minverhex) configure:23032: $? = 0 configure:23038: result: python configure:23046: checking for python configure:23064: found /usr/bin/python configure:23076: result: /usr/bin/python configure:23094: checking for python version configure:23101: result: 2.7 configure:23113: checking for python platform configure:23120: result: linux2 configure:23146: checking for python script directory configure:23181: result: ${prefix}/lib/python2.7/site-packages configure:23190: checking for python extension module directory configure:23225: result: ${exec_prefix}/lib64/python2.7/site-packages configure:23346: checking for dlopen configure:23359: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -ldl >&5 conftest.c:46:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:23359: $? = 0 configure:23366: result: dlopen configure:23732: checking whether pthreads work with -pthread configure:23815: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -pthread -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -ldl >&5 conftest.c:47:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ conftest.c: In function 'main': conftest.c:50:22: warning: null argument where non-null required (argument 1) [-Wnonnull] pthread_attr_init(0); pthread_cleanup_push(0, 0); ^ conftest.c:51:22: warning: null argument where non-null required (argument 1) [-Wnonnull] pthread_create(0,0,0,0); pthread_cleanup_pop(0); ^ conftest.c:51:22: warning: null argument where non-null required (argument 3) [-Wnonnull] conftest.c:49:15: warning: 'th' is used uninitialized in this function [-Wuninitialized] pthread_t th; pthread_join(th, 0); ^ configure:23815: $? = 0 configure:23824: result: yes configure:23843: checking for joinable pthread attribute configure:23858: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -pthread -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -ldl >&5 conftest.c:47:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:23858: $? = 0 configure:23864: result: PTHREAD_CREATE_JOINABLE configure:23874: checking if more special flags are required for pthreads configure:23881: result: no configure:25686: checking for MPI (MPI compiler wrapper test) configure:25702: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -ldl >&5 conftest.c:48:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:25702: $? = 0 configure:25713: result: yes configure:26140: checking for MPI2 one-sided communication configure:26153: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -ldl >&5 conftest.c:49:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:26153: $? = 0 configure:26163: result: yes configure:26165: checking for MPI in place configure:26178: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -ldl >&5 conftest.c:50:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:26178: $? = 0 configure:26188: result: yes configure:26191: checking for MPI Neighborhood collectives configure:26209: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -ldl >&5 conftest.c:51:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ conftest.c: In function 'main': conftest.c:56:23: warning: 'sbuf' is used uninitialized in this function [-Wuninitialized] MPI_Neighbor_alltoallv(sbuf, scounts, sdispls, MPI_INT, ^ conftest.c:56:23: warning: 'scounts' is used uninitialized in this function [-Wuninitialized] conftest.c:56:23: warning: 'sdispls' is used uninitialized in this function [-Wuninitialized] conftest.c:56:23: warning: 'rbuf' is used uninitialized in this function [-Wuninitialized] conftest.c:56:23: warning: 'rcounts' is used uninitialized in this function [-Wuninitialized] conftest.c:56:23: warning: 'rdispls' is used uninitialized in this function [-Wuninitialized] conftest.c:56:23: warning: 'comm' is used uninitialized in this function [-Wuninitialized] configure:26209: $? = 0 configure:26219: result: yes configure:26221: checking for MPI nonblocking barrier configure:26236: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -ldl >&5 conftest.c:52:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ conftest.c: In function 'main': conftest.c:56:23: warning: 'comm' is used uninitialized in this function [-Wuninitialized] MPI_Ibarrier(comm, &r); ^ configure:26236: $? = 0 configure:26246: result: yes configure:26544: checking for ptscotch.h configure:26544: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -I/home/cs-chin1/SOFTWARE/Scotch/scotch_6.0.3/include -DOMPI_SKIP_MPICXX conftest.c >&5 configure:26544: $? = 0 configure:26544: result: yes configure:26585: checking for PT-SCOTCH configure:26608: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -I/home/cs-chin1/SOFTWARE/Scotch/scotch_6.0.3/include -DOMPI_SKIP_MPICXX conftest.c >&5 conftest.c:57:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:26608: $? = 0 configure:26632: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -I/home/cs-chin1/SOFTWARE/Scotch/scotch_6.0.3/include -DOMPI_SKIP_MPICXX -O -Wl,--allow-multiple-definition -fopenmp -L/home/cs-chin1/SOFTWARE/Scotch/scotch_6.0.3/lib conftest.c -Wl,--no-as-needed -lptscotch -lptscotcherr -lscotch -lscotcherr -lm -ldl >&5 conftest.c:57:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:26632: $? = 0 configure:26644: result: yes configure:26870: checking hdf5.h usability configure:26870: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -I/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/hdf5/include conftest.c >&5 configure:26870: $? = 0 configure:26870: result: yes configure:26870: checking hdf5.h presence configure:26870: mpicc -E -D_POSIX_SOURCE -DNDEBUG -I/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/hdf5/include conftest.c configure:26870: $? = 0 configure:26870: result: yes configure:26870: checking for hdf5.h configure:26870: result: yes configure:26968: checking for H5Fopen in -lhdf5-shared configure:26993: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -I/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/hdf5/include -O -Wl,--allow-multiple-definition -fopenmp -L/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/hdf5/lib conftest.c -lhdf5-shared -lhdf5-shared -ldl >&5 conftest.c:61:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char H5Fopen (); ^ conftest.c:63:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/ld: cannot find -lhdf5-shared /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/ld: cannot find -lhdf5-shared collect2: error: ld returned 1 exit status configure:26993: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_LONG_LONG 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_PTRDIFF_T 1 | #define SIZEOF_VOID_P 8 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define HAVE_LONG_GNUM 1 | #define HAVE_OPENMP 1 | #define HAVE_OPENMP_SIMD 1 | #define CS_REVISION "5.3.1-63ac9a419a" | #define HAVE_DLOPEN 1 | #define HAVE_PTHREAD 1 | #define HAVE_MPI 1 | #define HAVE_MPI_ONE_SIDED 1 | #define HAVE_MPI_IN_PLACE 1 | #define HAVE_MPI_NEIGHBOR_COLL 1 | #define HAVE_MPI_IBARRIER 1 | #define HAVE_PTSCOTCH_H 1 | #define HAVE_PTSCOTCH 1 | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char H5Fopen (); | int | main () | { | return H5Fopen (); | ; | return 0; | } configure:27003: result: no configure:26968: checking for H5Fopen in -lhdf5-static configure:26993: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -I/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/hdf5/include -O -Wl,--allow-multiple-definition -fopenmp -L/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/hdf5/lib conftest.c -lhdf5-static -lhdf5-static -ldl >&5 conftest.c:61:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char H5Fopen (); ^ conftest.c:63:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/ld: cannot find -lhdf5-static /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/ld: cannot find -lhdf5-static collect2: error: ld returned 1 exit status configure:26993: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_LONG_LONG 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_PTRDIFF_T 1 | #define SIZEOF_VOID_P 8 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define HAVE_LONG_GNUM 1 | #define HAVE_OPENMP 1 | #define HAVE_OPENMP_SIMD 1 | #define CS_REVISION "5.3.1-63ac9a419a" | #define HAVE_DLOPEN 1 | #define HAVE_PTHREAD 1 | #define HAVE_MPI 1 | #define HAVE_MPI_ONE_SIDED 1 | #define HAVE_MPI_IN_PLACE 1 | #define HAVE_MPI_NEIGHBOR_COLL 1 | #define HAVE_MPI_IBARRIER 1 | #define HAVE_PTSCOTCH_H 1 | #define HAVE_PTSCOTCH 1 | #define HAVE_HDF5_H 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char H5Fopen (); | int | main () | { | return H5Fopen (); | ; | return 0; | } configure:27003: result: no configure:26968: checking for H5Fopen in -lhdf5 configure:26993: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -I/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/hdf5/include -O -Wl,--allow-multiple-definition -fopenmp -L/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/hdf5/lib conftest.c -lhdf5 -lhdf5 -ldl >&5 conftest.c:61:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char H5Fopen (); ^ conftest.c:63:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:26993: $? = 0 configure:27003: result: yes configure:27425: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -I/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/med/include -I/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/hdf5/include conftest.c >&5 conftest.c:58:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:27425: $? = 0 configure:27426: result: MED >= 3.0 headers found configure:27487: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -I/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/med/include -I/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/hdf5/include -L/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/med/lib -L/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/hdf5/lib -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lmedC -lhdf5 -ldl >&5 conftest.c:58:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:27487: $? = 0 configure:27572: g++ -o conftest -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wunused -Wfloat-equal -Wmisleading-indentation -Wduplicated-cond -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG -I/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/med/include -I/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/hdf5/include -L/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/med/lib -L/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/hdf5/lib -O -Wl,--allow-multiple-definition -fopenmp conftest.cpp -lmedC -lhdf5 -ldl >&5 conftest.cpp: In function 'int main()': conftest.cpp:61:7: error: 'MEDparFileOpen' was not declared in this scope (void)MEDparFileOpen(NULL, MED_ACC_RDONLY, MPI_COMM_NULL, MPI_INFO_NULL); ^~~~~~~~~~~~~~ conftest.cpp:61:7: note: suggested alternative: 'MEDmemFileOpen' (void)MEDparFileOpen(NULL, MED_ACC_RDONLY, MPI_COMM_NULL, MPI_INFO_NULL); ^~~~~~~~~~~~~~ MEDmemFileOpen configure:27572: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_LONG_LONG 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_PTRDIFF_T 1 | #define SIZEOF_VOID_P 8 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define HAVE_LONG_GNUM 1 | #define HAVE_OPENMP 1 | #define HAVE_OPENMP_SIMD 1 | #define CS_REVISION "5.3.1-63ac9a419a" | #define HAVE_DLOPEN 1 | #define HAVE_PTHREAD 1 | #define HAVE_MPI 1 | #define HAVE_MPI_ONE_SIDED 1 | #define HAVE_MPI_IN_PLACE 1 | #define HAVE_MPI_NEIGHBOR_COLL 1 | #define HAVE_MPI_IBARRIER 1 | #define HAVE_PTSCOTCH_H 1 | #define HAVE_PTSCOTCH 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_MED 1 | /* end confdefs.h. */ | #include | #include | int | main () | { | (void)MEDparFileOpen(NULL, MED_ACC_RDONLY, MPI_COMM_NULL, MPI_INFO_NULL); | ; | return 0; | } | configure:27579: WARNING: no MED file MPI support configure:27731: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:56:28: fatal error: libccmio/ccmio.h: No such file or directory compilation terminated. configure:27731: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_LONG_LONG 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_PTRDIFF_T 1 | #define SIZEOF_VOID_P 8 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define HAVE_LONG_GNUM 1 | #define HAVE_OPENMP 1 | #define HAVE_OPENMP_SIMD 1 | #define CS_REVISION "5.3.1-63ac9a419a" | #define HAVE_DLOPEN 1 | #define HAVE_PTHREAD 1 | #define HAVE_MPI 1 | #define HAVE_MPI_ONE_SIDED 1 | #define HAVE_MPI_IN_PLACE 1 | #define HAVE_MPI_NEIGHBOR_COLL 1 | #define HAVE_MPI_IBARRIER 1 | #define HAVE_PTSCOTCH_H 1 | #define HAVE_PTSCOTCH 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_MED 1 | /* end confdefs.h. */ | #include | int | main () | { | int i = kCCMIONoErr; | ; | return 0; | } configure:27737: result: CCMIO headers not found configure:28036: checking freesteam/steam.h usability configure:28036: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:89:29: fatal error: freesteam/steam.h: No such file or directory compilation terminated. configure:28036: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_LONG_LONG 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_PTRDIFF_T 1 | #define SIZEOF_VOID_P 8 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define HAVE_LONG_GNUM 1 | #define HAVE_OPENMP 1 | #define HAVE_OPENMP_SIMD 1 | #define CS_REVISION "5.3.1-63ac9a419a" | #define HAVE_DLOPEN 1 | #define HAVE_PTHREAD 1 | #define HAVE_MPI 1 | #define HAVE_MPI_ONE_SIDED 1 | #define HAVE_MPI_IN_PLACE 1 | #define HAVE_MPI_NEIGHBOR_COLL 1 | #define HAVE_MPI_IBARRIER 1 | #define HAVE_PTSCOTCH_H 1 | #define HAVE_PTSCOTCH 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_MED 1 | /* end confdefs.h. */ | #include | #ifdef HAVE_SYS_TYPES_H | # include | #endif | #ifdef HAVE_SYS_STAT_H | # include | #endif | #ifdef STDC_HEADERS | # include | # include | #else | # ifdef HAVE_STDLIB_H | # include | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include | # endif | # include | #endif | #ifdef HAVE_STRINGS_H | # include | #endif | #ifdef HAVE_INTTYPES_H | # include | #endif | #ifdef HAVE_STDINT_H | # include | #endif | #ifdef HAVE_UNISTD_H | # include | #endif | #include configure:28036: result: no configure:28036: checking freesteam/steam.h presence configure:28036: mpicc -E -D_POSIX_SOURCE -DNDEBUG conftest.c conftest.c:56:29: fatal error: freesteam/steam.h: No such file or directory compilation terminated. configure:28036: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_LONG_LONG 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_PTRDIFF_T 1 | #define SIZEOF_VOID_P 8 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define HAVE_LONG_GNUM 1 | #define HAVE_OPENMP 1 | #define HAVE_OPENMP_SIMD 1 | #define CS_REVISION "5.3.1-63ac9a419a" | #define HAVE_DLOPEN 1 | #define HAVE_PTHREAD 1 | #define HAVE_MPI 1 | #define HAVE_MPI_ONE_SIDED 1 | #define HAVE_MPI_IN_PLACE 1 | #define HAVE_MPI_NEIGHBOR_COLL 1 | #define HAVE_MPI_IBARRIER 1 | #define HAVE_PTSCOTCH_H 1 | #define HAVE_PTSCOTCH 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_MED 1 | /* end confdefs.h. */ | #include configure:28036: result: no configure:28036: checking for freesteam/steam.h configure:28036: result: no configure:28242: g++ -o conftest -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wunused -Wfloat-equal -Wmisleading-indentation -Wduplicated-cond -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.cpp -lCoolProp -ldl >&5 conftest.cpp:56:10: fatal error: CoolProp.h: No such file or directory #include "CoolProp.h" ^~~~~~~~~~~~ compilation terminated. configure:28242: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_LONG_LONG 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_PTRDIFF_T 1 | #define SIZEOF_VOID_P 8 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define HAVE_LONG_GNUM 1 | #define HAVE_OPENMP 1 | #define HAVE_OPENMP_SIMD 1 | #define CS_REVISION "5.3.1-63ac9a419a" | #define HAVE_DLOPEN 1 | #define HAVE_PTHREAD 1 | #define HAVE_MPI 1 | #define HAVE_MPI_ONE_SIDED 1 | #define HAVE_MPI_IN_PLACE 1 | #define HAVE_MPI_NEIGHBOR_COLL 1 | #define HAVE_MPI_IBARRIER 1 | #define HAVE_PTSCOTCH_H 1 | #define HAVE_PTSCOTCH 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_MED 1 | /* end confdefs.h. */ | #include "CoolProp.h" | int | main () | { | std::vector t; | std::vector p; | std::vector z; | std::vector f; | std::vector o; | CoolProp::PropsSImulti(o, "T", t, "P", p, "", f, z); | ; | return 0; | } configure:28242: g++ -o conftest -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wunused -Wfloat-equal -Wmisleading-indentation -Wduplicated-cond -fdiagnostics-color=auto -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp -ldl conftest.cpp -lCoolProp -ldl >&5 conftest.cpp:56:10: fatal error: CoolProp.h: No such file or directory #include "CoolProp.h" ^~~~~~~~~~~~ compilation terminated. configure:28242: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_LONG_LONG 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_PTRDIFF_T 1 | #define SIZEOF_VOID_P 8 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define HAVE_LONG_GNUM 1 | #define HAVE_OPENMP 1 | #define HAVE_OPENMP_SIMD 1 | #define CS_REVISION "5.3.1-63ac9a419a" | #define HAVE_DLOPEN 1 | #define HAVE_PTHREAD 1 | #define HAVE_MPI 1 | #define HAVE_MPI_ONE_SIDED 1 | #define HAVE_MPI_IN_PLACE 1 | #define HAVE_MPI_NEIGHBOR_COLL 1 | #define HAVE_MPI_IBARRIER 1 | #define HAVE_PTSCOTCH_H 1 | #define HAVE_PTSCOTCH 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_MED 1 | /* end confdefs.h. */ | #include "CoolProp.h" | int | main () | { | std::vector t; | std::vector p; | std::vector z; | std::vector f; | std::vector o; | CoolProp::PropsSImulti(o, "T", t, "P", p, "", f, z); | ; | return 0; | } configure:28365: checking for Zlib configure:28378: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:58:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ conftest.c: In function 'main': conftest.c:60:15: warning: assignment from incompatible pointer type [-Wincompatible-pointer-types] gzFile *f; f = gzopen("filename", "r"); ^ conftest.c:60:10: warning: variable 'f' set but not used [-Wunused-but-set-variable] gzFile *f; f = gzopen("filename", "r"); ^ configure:28378: $? = 0 configure:28398: result: yes configure:28412: checking size of z_off_t configure:28456: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c: In function 'main': conftest.c:76:12: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long unsigned int' [-Wformat=] printf("\ncompile-time sizes for unsigned int, unsigned long, or void *\n" ^ conftest.c:76:12: warning: format '%d' expects argument of type 'int', but argument 6 has type 'long unsigned int' [-Wformat=] conftest.c:76:12: warning: format '%d' expects argument of type 'int', but argument 7 has type 'long unsigned int' [-Wformat=] conftest.c:61:14: warning: unused parameter 'argc' [-Wunused-parameter] int main(int argc, char** argv) ^ conftest.c:61:27: warning: unused parameter 'argv' [-Wunused-parameter] int main(int argc, char** argv) ^ configure:28456: $? = 0 configure:28456: ./conftest configure:28456: $? = 0 configure:28463: result: 8 configure:28588: g++ -c -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wunused -Wfloat-equal -Wmisleading-indentation -Wduplicated-cond -fdiagnostics-color=auto -DOMPI_SKIP_MPICXX -I/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/MEDCOUPLING/include -D_POSIX_SOURCE -DNDEBUG conftest.cpp >&5 In file included from conftest.cpp:58:0: /home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/MEDCOUPLING/include/MEDCouplingFieldDouble.hxx:134:101: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] MEDCOUPLING_EXPORT MEDCouplingFieldDouble *operator+(const MEDCouplingFieldDouble& other) const throw(INTERP_KERNEL::Exception) { return AddFields(this,&other); } ^~~~~ /home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/MEDCOUPLING/include/MEDCouplingFieldDouble.hxx:137:101: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] MEDCOUPLING_EXPORT MEDCouplingFieldDouble *operator-(const MEDCouplingFieldDouble& other) const throw(INTERP_KERNEL::Exception) { return SubstractFields(this,&other); } ^~~~~ /home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/MEDCOUPLING/include/MEDCouplingFieldDouble.hxx:140:82: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] MEDCouplingFieldDouble *operator*(const MEDCouplingFieldDouble& other) const throw(INTERP_KERNEL::Exception) { return MultiplyFields(this,&other); } ^~~~~ /home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/MEDCOUPLING/include/MEDCouplingFieldDouble.hxx:143:101: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] MEDCOUPLING_EXPORT MEDCouplingFieldDouble *operator/(const MEDCouplingFieldDouble& other) const throw(INTERP_KERNEL::Exception) { return DivideFields(this,&other); } ^~~~~ conftest.cpp: In function 'int main()': conftest.cpp:65:27: warning: unused variable 'f' [-Wunused-variable] MEDCouplingFieldDouble *f = ReadFieldCell("path", "name", 0, f_name, 0, 0); ^ configure:28588: $? = 0 configure:28659: g++ -o conftest -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wunused -Wfloat-equal -Wmisleading-indentation -Wduplicated-cond -fdiagnostics-color=auto -DOMPI_SKIP_MPICXX -I/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/MEDCOUPLING/include -D_POSIX_SOURCE -DNDEBUG -L/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/MEDCOUPLING/lib -L/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/med/lib -L/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/hdf5/lib -O -Wl,--allow-multiple-definition -fopenmp conftest.cpp -lmedcoupling -linterpkernel -lmedcouplingremapper -lmedloader -lmedC -lhdf5 -lz -ldl >&5 In file included from conftest.cpp:58:0: /home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/MEDCOUPLING/include/MEDCouplingFieldDouble.hxx:134:101: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] MEDCOUPLING_EXPORT MEDCouplingFieldDouble *operator+(const MEDCouplingFieldDouble& other) const throw(INTERP_KERNEL::Exception) { return AddFields(this,&other); } ^~~~~ /home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/MEDCOUPLING/include/MEDCouplingFieldDouble.hxx:137:101: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] MEDCOUPLING_EXPORT MEDCouplingFieldDouble *operator-(const MEDCouplingFieldDouble& other) const throw(INTERP_KERNEL::Exception) { return SubstractFields(this,&other); } ^~~~~ /home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/MEDCOUPLING/include/MEDCouplingFieldDouble.hxx:140:82: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] MEDCouplingFieldDouble *operator*(const MEDCouplingFieldDouble& other) const throw(INTERP_KERNEL::Exception) { return MultiplyFields(this,&other); } ^~~~~ /home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/MEDCOUPLING/include/MEDCouplingFieldDouble.hxx:143:101: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] MEDCOUPLING_EXPORT MEDCouplingFieldDouble *operator/(const MEDCouplingFieldDouble& other) const throw(INTERP_KERNEL::Exception) { return DivideFields(this,&other); } ^~~~~ conftest.cpp: In function 'int main()': conftest.cpp:65:27: warning: unused variable 'f' [-Wunused-variable] MEDCouplingFieldDouble *f = ReadFieldCell("path", "name", 0, f_name, 0, 0); ^ configure:28659: $? = 0 configure:28725: g++ -o conftest -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wunused -Wfloat-equal -Wmisleading-indentation -Wduplicated-cond -fdiagnostics-color=auto -DOMPI_SKIP_MPICXX -I/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/MEDCOUPLING/include -DOMPI_SKIP_MPICXX -I/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/MEDCOUPLING/include -D_POSIX_SOURCE -DNDEBUG -L/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/MEDCOUPLING/lib -L/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/med/lib -L/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/hdf5/lib -O -Wl,--allow-multiple-definition -fopenmp conftest.cpp -lparamedmem -lmedcoupling -linterpkernel -lmedcouplingremapper -lmedloader -lmedC -lhdf5 -lz -ldl >&5 conftest.cpp:60:10: fatal error: InterpKernelDEC.hxx: No such file or directory #include ^~~~~~~~~~~~~~~~~~~~~ compilation terminated. configure:28725: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_LONG_LONG 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_PTRDIFF_T 1 | #define SIZEOF_VOID_P 8 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define HAVE_LONG_GNUM 1 | #define HAVE_OPENMP 1 | #define HAVE_OPENMP_SIMD 1 | #define CS_REVISION "5.3.1-63ac9a419a" | #define HAVE_DLOPEN 1 | #define HAVE_PTHREAD 1 | #define HAVE_MPI 1 | #define HAVE_MPI_ONE_SIDED 1 | #define HAVE_MPI_IN_PLACE 1 | #define HAVE_MPI_NEIGHBOR_COLL 1 | #define HAVE_MPI_IBARRIER 1 | #define HAVE_PTSCOTCH_H 1 | #define HAVE_PTSCOTCH 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_MED 1 | #define HAVE_ZLIB 1 | #define SIZEOF_Z_OFF_T 8 | #define HAVE_MEDCOUPLING 1 | #define HAVE_MEDCOUPLING_LOADER 1 | /* end confdefs.h. */ | #include | #include | int | main () | { | using namespace MEDCoupling; | int procs_source_c[1]={0}; | std::set procs_source(procs_source_c, procs_source_c+1); | int procs_target_c[1]={1}; | std::set procs_target(procs_target_c, procs_target_c+1); | InterpKernelDEC *dec = new InterpKernelDEC(procs_source, procs_target); | ; | return 0; | } | configure:28725: g++ -o conftest -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wunused -Wfloat-equal -Wmisleading-indentation -Wduplicated-cond -fdiagnostics-color=auto -DOMPI_SKIP_MPICXX -I/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/MEDCOUPLING/include -DOMPI_SKIP_MPICXX -I/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/MEDCOUPLING/include -D_POSIX_SOURCE -DNDEBUG -L/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/MEDCOUPLING/lib -L/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/med/lib -L/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/hdf5/lib -O -Wl,--allow-multiple-definition -fopenmp conftest.cpp -lparamedmem -lparamedloader -lmedcoupling -linterpkernel -lmedcouplingremapper -lmedloader -lmedC -lhdf5 -lz -ldl >&5 conftest.cpp:60:10: fatal error: InterpKernelDEC.hxx: No such file or directory #include ^~~~~~~~~~~~~~~~~~~~~ compilation terminated. configure:28725: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_LONG_LONG 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_PTRDIFF_T 1 | #define SIZEOF_VOID_P 8 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define HAVE_LONG_GNUM 1 | #define HAVE_OPENMP 1 | #define HAVE_OPENMP_SIMD 1 | #define CS_REVISION "5.3.1-63ac9a419a" | #define HAVE_DLOPEN 1 | #define HAVE_PTHREAD 1 | #define HAVE_MPI 1 | #define HAVE_MPI_ONE_SIDED 1 | #define HAVE_MPI_IN_PLACE 1 | #define HAVE_MPI_NEIGHBOR_COLL 1 | #define HAVE_MPI_IBARRIER 1 | #define HAVE_PTSCOTCH_H 1 | #define HAVE_PTSCOTCH 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_MED 1 | #define HAVE_ZLIB 1 | #define SIZEOF_Z_OFF_T 8 | #define HAVE_MEDCOUPLING 1 | #define HAVE_MEDCOUPLING_LOADER 1 | /* end confdefs.h. */ | #include | #include | int | main () | { | using namespace MEDCoupling; | int procs_source_c[1]={0}; | std::set procs_source(procs_source_c, procs_source_c+1); | int procs_target_c[1]={1}; | std::set procs_target(procs_target_c, procs_target_c+1); | InterpKernelDEC *dec = new InterpKernelDEC(procs_source, procs_target); | ; | return 0; | } | configure:28747: WARNING: no ParaMEDMEM support configure:29515: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:60:18: fatal error: vofi.h: No such file or directory compilation terminated. configure:29515: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_LONG_LONG 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_PTRDIFF_T 1 | #define SIZEOF_VOID_P 8 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define HAVE_LONG_GNUM 1 | #define HAVE_OPENMP 1 | #define HAVE_OPENMP_SIMD 1 | #define CS_REVISION "5.3.1-63ac9a419a" | #define HAVE_DLOPEN 1 | #define HAVE_PTHREAD 1 | #define HAVE_MPI 1 | #define HAVE_MPI_ONE_SIDED 1 | #define HAVE_MPI_IN_PLACE 1 | #define HAVE_MPI_NEIGHBOR_COLL 1 | #define HAVE_MPI_IBARRIER 1 | #define HAVE_PTSCOTCH_H 1 | #define HAVE_PTSCOTCH 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_MED 1 | #define HAVE_ZLIB 1 | #define SIZEOF_Z_OFF_T 8 | #define HAVE_MEDCOUPLING 1 | #define HAVE_MEDCOUPLING_LOADER 1 | /* end confdefs.h. */ | #include | | int | main () | { | | ; | return 0; | } configure:29521: result: Vofi headers not found configure:29598: WARNING: no VOFI support configure:29643: checking for pdflatex configure:29661: found /usr/bin/pdflatex configure:29673: result: /usr/bin/pdflatex configure:29691: checking for bibtex configure:29709: found /usr/bin/bibtex configure:29721: result: /usr/bin/bibtex configure:29739: checking for makeindex configure:29757: found /usr/bin/makeindex configure:29769: result: /usr/bin/makeindex configure:29787: checking for fig2dev configure:29805: found /usr/bin/fig2dev configure:29817: result: /usr/bin/fig2dev configure:29860: checking for doxygen configure:29878: found /usr/bin/doxygen configure:29890: result: /usr/bin/doxygen configure:29908: checking for dot configure:29926: found /usr/bin/dot configure:29938: result: /usr/bin/dot configure:29971: checking for sphinx-build configure:30004: result: no configure:30010: WARNING: sphinx-build not found configure:30626: checking for ANSI C header files configure:30730: result: yes configure:30741: checking for sys/types.h configure:30741: result: yes configure:30741: checking sys/utsname.h usability configure:30741: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 configure:30741: $? = 0 configure:30741: result: yes configure:30741: checking sys/utsname.h presence configure:30741: mpicc -E -D_POSIX_SOURCE -DNDEBUG conftest.c configure:30741: $? = 0 configure:30741: result: yes configure:30741: checking for sys/utsname.h configure:30741: result: yes configure:30741: checking for sys/stat.h configure:30741: result: yes configure:30741: checking dirent.h usability configure:30741: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 configure:30741: $? = 0 configure:30741: result: yes configure:30741: checking dirent.h presence configure:30741: mpicc -E -D_POSIX_SOURCE -DNDEBUG conftest.c configure:30741: $? = 0 configure:30741: result: yes configure:30741: checking for dirent.h configure:30741: result: yes configure:30741: checking stddef.h usability configure:30741: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 configure:30741: $? = 0 configure:30741: result: yes configure:30741: checking stddef.h presence configure:30741: mpicc -E -D_POSIX_SOURCE -DNDEBUG conftest.c configure:30741: $? = 0 configure:30741: result: yes configure:30741: checking for stddef.h configure:30741: result: yes configure:30754: checking for unistd.h configure:30754: result: yes configure:30754: checking fcntl.h usability configure:30754: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 configure:30754: $? = 0 configure:30754: result: yes configure:30754: checking fcntl.h presence configure:30754: mpicc -E -D_POSIX_SOURCE -DNDEBUG conftest.c configure:30754: $? = 0 configure:30754: result: yes configure:30754: checking for fcntl.h configure:30754: result: yes configure:30754: checking for sys/types.h configure:30754: result: yes configure:30754: checking sys/signal.h usability configure:30754: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 configure:30754: $? = 0 configure:30754: result: yes configure:30754: checking sys/signal.h presence configure:30754: mpicc -E -D_POSIX_SOURCE -DNDEBUG conftest.c configure:30754: $? = 0 configure:30754: result: yes configure:30754: checking for sys/signal.h configure:30754: result: yes configure:30767: checking sys/procfs.h usability configure:30767: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 configure:30767: $? = 0 configure:30767: result: yes configure:30767: checking sys/procfs.h presence configure:30767: mpicc -E -D_POSIX_SOURCE -DNDEBUG conftest.c configure:30767: $? = 0 configure:30767: result: yes configure:30767: checking for sys/procfs.h configure:30767: result: yes configure:30767: checking sys/sysinfo.h usability configure:30767: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 configure:30767: $? = 0 configure:30767: result: yes configure:30767: checking sys/sysinfo.h presence configure:30767: mpicc -E -D_POSIX_SOURCE -DNDEBUG conftest.c configure:30767: $? = 0 configure:30767: result: yes configure:30767: checking for sys/sysinfo.h configure:30767: result: yes configure:30767: checking sys/resource.h usability configure:30767: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 configure:30767: $? = 0 configure:30767: result: yes configure:30767: checking sys/resource.h presence configure:30767: mpicc -E -D_POSIX_SOURCE -DNDEBUG conftest.c configure:30767: $? = 0 configure:30767: result: yes configure:30767: checking for sys/resource.h configure:30767: result: yes configure:30780: checking float.h usability configure:30780: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 configure:30780: $? = 0 configure:30780: result: yes configure:30780: checking float.h presence configure:30780: mpicc -E -D_POSIX_SOURCE -DNDEBUG conftest.c configure:30780: $? = 0 configure:30780: result: yes configure:30780: checking for float.h configure:30780: result: yes configure:30780: checking for string.h configure:30780: result: yes configure:30780: checking sys/time.h usability configure:30780: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 configure:30780: $? = 0 configure:30780: result: yes configure:30780: checking sys/time.h presence configure:30780: mpicc -E -D_POSIX_SOURCE -DNDEBUG conftest.c configure:30780: $? = 0 configure:30780: result: yes configure:30780: checking for sys/time.h configure:30780: result: yes configure:30798: checking for mkdir configure:30798: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:99:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char mkdir (); ^ conftest.c:108:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30798: $? = 0 configure:30798: result: yes configure:30798: checking for chdir configure:30798: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:100:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char chdir (); ^ conftest.c:109:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30798: $? = 0 configure:30798: result: yes configure:30798: checking for stat configure:30798: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:101:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char stat (); ^ conftest.c:110:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30798: $? = 0 configure:30798: result: yes configure:30798: checking for dup2 configure:30798: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:102:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char dup2 (); ^ conftest.c:111:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30798: $? = 0 configure:30798: result: yes configure:30798: checking for access configure:30798: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:103:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char access (); ^ conftest.c:112:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30798: $? = 0 configure:30798: result: yes configure:30809: checking for snprintf configure:30809: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:104:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char snprintf (); ^ conftest.c:104:6: warning: conflicting types for built-in function 'snprintf' char snprintf (); ^ conftest.c:113:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30809: $? = 0 configure:30809: result: yes configure:30821: checking for getcwd configure:30821: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:105:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char getcwd (); ^ conftest.c:114:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30821: $? = 0 configure:30821: result: yes configure:30821: checking for sleep configure:30821: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:106:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char sleep (); ^ conftest.c:115:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30821: $? = 0 configure:30821: result: yes configure:30833: checking for getpwuid configure:30833: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:107:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char getpwuid (); ^ conftest.c:116:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30833: $? = 0 configure:30833: result: yes configure:30833: checking for geteuid configure:30833: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:108:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char geteuid (); ^ conftest.c:117:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30833: $? = 0 configure:30833: result: yes configure:30844: checking for uname configure:30844: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:109:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char uname (); ^ conftest.c:118:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30844: $? = 0 configure:30844: result: yes configure:30856: checking for clock_gettime configure:30856: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:110:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char clock_gettime (); ^ conftest.c:119:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30856: $? = 0 configure:30856: result: yes configure:30856: checking for clock_getcpuclockid configure:30856: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:111:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char clock_getcpuclockid (); ^ conftest.c:120:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30856: $? = 0 configure:30856: result: yes configure:30868: checking for getrusage configure:30868: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:112:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char getrusage (); ^ conftest.c:121:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30868: $? = 0 configure:30868: result: yes configure:30868: checking for gettimeofday configure:30868: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:113:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char gettimeofday (); ^ conftest.c:122:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30868: $? = 0 configure:30868: result: yes configure:30868: checking for sbrk configure:30868: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:114:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char sbrk (); ^ conftest.c:123:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30868: $? = 0 configure:30868: result: yes configure:30868: checking for sysinfo configure:30868: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:115:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char sysinfo (); ^ conftest.c:124:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30868: $? = 0 configure:30868: result: yes configure:30879: checking for posix_memalign configure:30879: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:116:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char posix_memalign (); ^ conftest.c:125:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30879: $? = 0 configure:30879: result: yes configure:30890: checking for memset configure:30890: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:117:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char memset (); ^ conftest.c:117:6: warning: conflicting types for built-in function 'memset' char memset (); ^ conftest.c:126:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30890: $? = 0 configure:30890: result: yes configure:30901: checking for strtok_r configure:30901: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:118:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char strtok_r (); ^ conftest.c:127:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30901: $? = 0 configure:30901: result: yes configure:30916: checking for pow configure:30916: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl -lm >&5 conftest.c:119:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char pow (); ^ conftest.c:119:6: warning: conflicting types for built-in function 'pow' char pow (); ^ conftest.c:128:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30916: $? = 0 configure:30916: result: yes configure:30916: checking for modf configure:30916: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl -lm >&5 conftest.c:120:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char modf (); ^ conftest.c:120:6: warning: conflicting types for built-in function 'modf' char modf (); ^ conftest.c:129:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30916: $? = 0 configure:30916: result: yes configure:30916: checking for tgamma configure:30916: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl -lm >&5 conftest.c:121:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char tgamma (); ^ conftest.c:121:6: warning: conflicting types for built-in function 'tgamma' char tgamma (); ^ conftest.c:130:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30916: $? = 0 configure:30916: result: yes configure:30916: checking for erf configure:30916: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl -lm >&5 conftest.c:122:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] char erf (); ^ conftest.c:122:6: warning: conflicting types for built-in function 'erf' char erf (); ^ conftest.c:131:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:30916: $? = 0 configure:30916: result: yes configure:30927: checking for working strtod configure:30968: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:135:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] double strtod (); ^ conftest.c:138:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main() ^ conftest.c: In function 'main': conftest.c:142:20: warning: initialization discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] char *string = " +69"; ^ conftest.c:146:15: warning: comparing floating point with == or != is unsafe [-Wfloat-equal] if (value != 69 || term != (string + 4)) ^ conftest.c:153:20: warning: initialization discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] char *string = "NaN"; ^ configure:30968: $? = 0 configure:30968: ./conftest configure:30968: $? = 0 configure:30978: result: yes configure:31055: checking for special C compiler options needed for large files configure:31100: result: no configure:31106: checking for _FILE_OFFSET_BITS value needed for large files configure:31131: mpicc -c -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG conftest.c >&5 conftest.c:110:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:31131: $? = 0 configure:31163: result: no configure:31248: checking for _LARGEFILE_SOURCE value needed for large files configure:31267: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:103:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ conftest.c: In function 'main': conftest.c:105:34: error: 'fseeko' undeclared (first use in this function) int (*fp) (FILE *, off_t, int) = fseeko; ^ conftest.c:105:34: note: each undeclared identifier is reported only once for each function it appears in conftest.c:106:13: warning: implicit declaration of function 'fseeko' [-Wimplicit-function-declaration] return fseeko (stdin, 0, 0) && fp (stdin, 0, 0); ^ configure:31267: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_LONG_LONG 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_PTRDIFF_T 1 | #define SIZEOF_VOID_P 8 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define HAVE_LONG_GNUM 1 | #define HAVE_OPENMP 1 | #define HAVE_OPENMP_SIMD 1 | #define CS_REVISION "5.3.1-63ac9a419a" | #define HAVE_DLOPEN 1 | #define HAVE_PTHREAD 1 | #define HAVE_MPI 1 | #define HAVE_MPI_ONE_SIDED 1 | #define HAVE_MPI_IN_PLACE 1 | #define HAVE_MPI_NEIGHBOR_COLL 1 | #define HAVE_MPI_IBARRIER 1 | #define HAVE_PTSCOTCH_H 1 | #define HAVE_PTSCOTCH 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_MED 1 | #define HAVE_ZLIB 1 | #define SIZEOF_Z_OFF_T 8 | #define HAVE_MEDCOUPLING 1 | #define HAVE_MEDCOUPLING_LOADER 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_DIRENT_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_SIGNAL_H 1 | #define HAVE_SYS_PROCFS_H 1 | #define HAVE_SYS_SYSINFO_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_FLOAT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_MKDIR 1 | #define HAVE_CHDIR 1 | #define HAVE_STAT 1 | #define HAVE_DUP2 1 | #define HAVE_ACCESS 1 | #define HAVE_SNPRINTF 1 | #define HAVE_GETCWD 1 | #define HAVE_SLEEP 1 | #define HAVE_GETPWUID 1 | #define HAVE_GETEUID 1 | #define HAVE_UNAME 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_CLOCK_GETCPUCLOCKID 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_SBRK 1 | #define HAVE_SYSINFO 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_MEMSET 1 | #define HAVE_STRTOK_R 1 | #define HAVE_POW 1 | #define HAVE_MODF 1 | #define HAVE_TGAMMA 1 | #define HAVE_ERF 1 | /* end confdefs.h. */ | #include /* for off_t */ | #include | int | main () | { | int (*fp) (FILE *, off_t, int) = fseeko; | return fseeko (stdin, 0, 0) && fp (stdin, 0, 0); | ; | return 0; | } configure:31286: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:104:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:31286: $? = 0 configure:31295: result: 1 configure:31323: checking size of off_t configure:31328: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:135:17: warning: function declaration isn't a prototype [-Wstrict-prototypes] static long int longval () { return (long int) (sizeof (off_t)); } ^ conftest.c:136:26: warning: function declaration isn't a prototype [-Wstrict-prototypes] static unsigned long int ulongval () { return (long int) (sizeof (off_t)); } ^ conftest.c:140:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:31328: $? = 0 configure:31328: ./conftest configure:31328: $? = 0 configure:31342: result: 8 configure:31416: checking for glibc backtrace configure:31433: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:109:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:31433: $? = 0 configure:31440: result: yes configure:31453: checking for glibc cplus_demangle configure:31466: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:106:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ conftest.c: In function 'main': conftest.c:108:17: warning: 's' is used uninitialized in this function [-Wuninitialized] const char *s; cplus_demangle(s, auto_demangling); ^ /tmp/ccEylYAP.o: In function `main': conftest.c:(.text+0xf): undefined reference to `cplus_demangle' collect2: error: ld returned 1 exit status configure:31466: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_LONG_LONG 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_PTRDIFF_T 1 | #define SIZEOF_VOID_P 8 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define HAVE_LONG_GNUM 1 | #define HAVE_OPENMP 1 | #define HAVE_OPENMP_SIMD 1 | #define CS_REVISION "5.3.1-63ac9a419a" | #define HAVE_DLOPEN 1 | #define HAVE_PTHREAD 1 | #define HAVE_MPI 1 | #define HAVE_MPI_ONE_SIDED 1 | #define HAVE_MPI_IN_PLACE 1 | #define HAVE_MPI_NEIGHBOR_COLL 1 | #define HAVE_MPI_IBARRIER 1 | #define HAVE_PTSCOTCH_H 1 | #define HAVE_PTSCOTCH 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_MED 1 | #define HAVE_ZLIB 1 | #define SIZEOF_Z_OFF_T 8 | #define HAVE_MEDCOUPLING 1 | #define HAVE_MEDCOUPLING_LOADER 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_DIRENT_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_SIGNAL_H 1 | #define HAVE_SYS_PROCFS_H 1 | #define HAVE_SYS_SYSINFO_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_FLOAT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_MKDIR 1 | #define HAVE_CHDIR 1 | #define HAVE_STAT 1 | #define HAVE_DUP2 1 | #define HAVE_ACCESS 1 | #define HAVE_SNPRINTF 1 | #define HAVE_GETCWD 1 | #define HAVE_SLEEP 1 | #define HAVE_GETPWUID 1 | #define HAVE_GETEUID 1 | #define HAVE_UNAME 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_CLOCK_GETCPUCLOCKID 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_SBRK 1 | #define HAVE_SYSINFO 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_MEMSET 1 | #define HAVE_STRTOK_R 1 | #define HAVE_POW 1 | #define HAVE_MODF 1 | #define HAVE_TGAMMA 1 | #define HAVE_ERF 1 | #define _LARGEFILE_SOURCE 1 | #define HAVE_FSEEKO 1 | #define SIZEOF_OFF_T 8 | #define HAVE_GLIBC_BACKTRACE 1 | /* end confdefs.h. */ | #include | int | main () | { | const char *s; cplus_demangle(s, auto_demangling); | ; | return 0; | } configure:31473: result: no configure:31547: checking whether NLS is requested configure:31556: result: yes configure:31596: checking for msgfmt configure: trying /usr/bin/msgfmt... 0 translated messages. configure:31628: result: /usr/bin/msgfmt configure:31637: checking for gmsgfmt configure:31668: result: /usr/bin/msgfmt configure:31718: checking for xgettext configure: trying /usr/bin/xgettext... /usr/bin/xgettext: warning: file '/dev/null' extension '' is unknown; will try C configure:31750: result: /usr/bin/xgettext configure:31795: checking for msgmerge configure: trying /usr/bin/msgmerge... configure:31826: result: /usr/bin/msgmerge configure:31884: checking for ld used by mpicc configure:31951: result: /usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/ld -m elf_x86_64 configure:31958: checking if the linker (/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/ld -m elf_x86_64) is GNU ld configure:31973: result: yes configure:31980: checking for shared library run path origin configure:31993: result: done configure:32565: checking for CFPreferencesCopyAppValue configure:32583: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl -Wl,-framework -Wl,CoreFoundation >&5 conftest.c:105:42: fatal error: CoreFoundation/CFPreferences.h: No such file or directory compilation terminated. configure:32583: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_LONG_LONG 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_PTRDIFF_T 1 | #define SIZEOF_VOID_P 8 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define HAVE_LONG_GNUM 1 | #define HAVE_OPENMP 1 | #define HAVE_OPENMP_SIMD 1 | #define CS_REVISION "5.3.1-63ac9a419a" | #define HAVE_DLOPEN 1 | #define HAVE_PTHREAD 1 | #define HAVE_MPI 1 | #define HAVE_MPI_ONE_SIDED 1 | #define HAVE_MPI_IN_PLACE 1 | #define HAVE_MPI_NEIGHBOR_COLL 1 | #define HAVE_MPI_IBARRIER 1 | #define HAVE_PTSCOTCH_H 1 | #define HAVE_PTSCOTCH 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_MED 1 | #define HAVE_ZLIB 1 | #define SIZEOF_Z_OFF_T 8 | #define HAVE_MEDCOUPLING 1 | #define HAVE_MEDCOUPLING_LOADER 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_DIRENT_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_SIGNAL_H 1 | #define HAVE_SYS_PROCFS_H 1 | #define HAVE_SYS_SYSINFO_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_FLOAT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_MKDIR 1 | #define HAVE_CHDIR 1 | #define HAVE_STAT 1 | #define HAVE_DUP2 1 | #define HAVE_ACCESS 1 | #define HAVE_SNPRINTF 1 | #define HAVE_GETCWD 1 | #define HAVE_SLEEP 1 | #define HAVE_GETPWUID 1 | #define HAVE_GETEUID 1 | #define HAVE_UNAME 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_CLOCK_GETCPUCLOCKID 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_SBRK 1 | #define HAVE_SYSINFO 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_MEMSET 1 | #define HAVE_STRTOK_R 1 | #define HAVE_POW 1 | #define HAVE_MODF 1 | #define HAVE_TGAMMA 1 | #define HAVE_ERF 1 | #define _LARGEFILE_SOURCE 1 | #define HAVE_FSEEKO 1 | #define SIZEOF_OFF_T 8 | #define HAVE_GLIBC_BACKTRACE 1 | #define HAVE_SOCKET 1 | /* end confdefs.h. */ | #include | int | main () | { | CFPreferencesCopyAppValue(NULL, NULL) | ; | return 0; | } configure:32592: result: no configure:32599: checking for CFLocaleCopyCurrent configure:32617: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl -Wl,-framework -Wl,CoreFoundation >&5 conftest.c:105:37: fatal error: CoreFoundation/CFLocale.h: No such file or directory compilation terminated. configure:32617: $? = 1 configure: failed program was: | /* confdefs.h */ | #define PACKAGE_NAME "code_saturne" | #define PACKAGE_TARNAME "code_saturne" | #define PACKAGE_VERSION "5.3.1" | #define PACKAGE_STRING "code_saturne 5.3.1" | #define PACKAGE_BUGREPORT "saturne-support@edf.fr" | #define PACKAGE_URL "http://code-saturne.org" | #define PACKAGE "code_saturne" | #define VERSION "5.3.1" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define TIME_WITH_SYS_TIME 1 | #define HAVE__BOOL 1 | #define HAVE_STDBOOL_H 1 | #define HAVE_LONG_LONG 1 | #define HAVE_UNSIGNED_LONG_LONG 1 | #define HAVE_INT32_T 1 | #define HAVE_INT64_T 1 | #define HAVE_UINT32_T 1 | #define HAVE_UINT64_T 1 | #define HAVE_PTRDIFF_T 1 | #define SIZEOF_VOID_P 8 | #define SIZEOF_SHORT 2 | #define SIZEOF_INT 4 | #define SIZEOF_LONG 8 | #define SIZEOF_LONG_LONG 8 | #define SIZEOF_FLOAT 4 | #define SIZEOF_DOUBLE 8 | #define HAVE_LONG_GNUM 1 | #define HAVE_OPENMP 1 | #define HAVE_OPENMP_SIMD 1 | #define CS_REVISION "5.3.1-63ac9a419a" | #define HAVE_DLOPEN 1 | #define HAVE_PTHREAD 1 | #define HAVE_MPI 1 | #define HAVE_MPI_ONE_SIDED 1 | #define HAVE_MPI_IN_PLACE 1 | #define HAVE_MPI_NEIGHBOR_COLL 1 | #define HAVE_MPI_IBARRIER 1 | #define HAVE_PTSCOTCH_H 1 | #define HAVE_PTSCOTCH 1 | #define HAVE_HDF5_H 1 | #define HAVE_HDF5 1 | #define HAVE_MED 1 | #define HAVE_ZLIB 1 | #define SIZEOF_Z_OFF_T 8 | #define HAVE_MEDCOUPLING 1 | #define HAVE_MEDCOUPLING_LOADER 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_UTSNAME_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_DIRENT_H 1 | #define HAVE_STDDEF_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_FCNTL_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_SIGNAL_H 1 | #define HAVE_SYS_PROCFS_H 1 | #define HAVE_SYS_SYSINFO_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define HAVE_FLOAT_H 1 | #define HAVE_STRING_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_MKDIR 1 | #define HAVE_CHDIR 1 | #define HAVE_STAT 1 | #define HAVE_DUP2 1 | #define HAVE_ACCESS 1 | #define HAVE_SNPRINTF 1 | #define HAVE_GETCWD 1 | #define HAVE_SLEEP 1 | #define HAVE_GETPWUID 1 | #define HAVE_GETEUID 1 | #define HAVE_UNAME 1 | #define HAVE_CLOCK_GETTIME 1 | #define HAVE_CLOCK_GETCPUCLOCKID 1 | #define HAVE_GETRUSAGE 1 | #define HAVE_GETTIMEOFDAY 1 | #define HAVE_SBRK 1 | #define HAVE_SYSINFO 1 | #define HAVE_POSIX_MEMALIGN 1 | #define HAVE_MEMSET 1 | #define HAVE_STRTOK_R 1 | #define HAVE_POW 1 | #define HAVE_MODF 1 | #define HAVE_TGAMMA 1 | #define HAVE_ERF 1 | #define _LARGEFILE_SOURCE 1 | #define HAVE_FSEEKO 1 | #define SIZEOF_OFF_T 8 | #define HAVE_GLIBC_BACKTRACE 1 | #define HAVE_SOCKET 1 | /* end confdefs.h. */ | #include | int | main () | { | CFLocaleCopyCurrent(); | ; | return 0; | } configure:32626: result: no configure:32675: checking for GNU gettext in libc configure:32699: mpicc -o conftest -std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp -D_POSIX_SOURCE -DNDEBUG -O -Wl,--allow-multiple-definition -fopenmp conftest.c -lz -ldl >&5 conftest.c:112:1: warning: function declaration isn't a prototype [-Wstrict-prototypes] main () ^ configure:32699: $? = 0 configure:32708: result: yes configure:33536: checking whether to use NLS configure:33538: result: yes configure:33541: checking where the gettext function comes from configure:33552: result: libc configure:33756: checking that generated files are newer than configure configure:33762: result: done configure:33933: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by code_saturne config.status 5.3.1, which was generated by GNU Autoconf 2.69. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on login-e-15 config.status:1699: creating Makefile config.status:1699: creating po/Makefile.in config.status:1699: creating preprocessor/Makefile config.status:1699: creating preprocessor/appli/Makefile config.status:1699: creating preprocessor/base/Makefile config.status:1699: creating preprocessor/pre-post/Makefile config.status:1699: creating preprocessor/util/Makefile config.status:1699: creating salome/Makefile config.status:1699: creating src/Makefile config.status:1699: creating src/apps/Makefile config.status:1699: creating src/gui/Makefile config.status:1699: creating src/bft/Makefile config.status:1699: creating src/fvm/Makefile config.status:1699: creating src/mei/Makefile config.status:1699: creating src/base/Makefile config.status:1699: creating src/atmo/Makefile config.status:1699: creating src/cdo/Makefile config.status:1699: creating src/cfbl/Makefile config.status:1699: creating src/cogz/Makefile config.status:1699: creating src/ctwr/Makefile config.status:1699: creating src/darc/Makefile config.status:1699: creating src/elec/Makefile config.status:1699: creating src/comb/Makefile config.status:1699: creating src/pprt/Makefile config.status:1699: creating src/lagr/Makefile config.status:1699: creating src/rayt/Makefile config.status:1699: creating src/turb/Makefile config.status:1699: creating src/alge/Makefile config.status:1699: creating src/mesh/Makefile config.status:1699: creating src/user/Makefile config.status:1699: creating src/user_examples/Makefile config.status:1699: creating gui/Makefile config.status:1699: creating gui/Base/Makefile config.status:1699: creating gui/Pages/Makefile config.status:1699: creating gui/studymanager_gui/Makefile config.status:1699: creating gui/trackcvg/Makefile config.status:1699: creating salome/fsi_coupling/Makefile config.status:1699: creating salome/fsi_coupling/idl/Makefile config.status:1699: creating salome/fsi_coupling/libmilieu/Makefile config.status:1699: creating salome/fsi_coupling/resources/Makefile config.status:1699: creating salome/fsi_coupling/src/Makefile config.status:1699: creating salome/fsi_coupling/src/FSI_ASTER/Makefile config.status:1699: creating salome/fsi_coupling/src/FSI_MILIEU/Makefile config.status:1699: creating salome/fsi_coupling/src/FSI_SATURNE/Makefile config.status:1699: creating salome/cfd_study/Makefile config.status:1699: creating salome/cfd_study/doc/Makefile config.status:1699: creating salome/cfd_study/idl/Makefile config.status:1699: creating salome/cfd_study/resources/Makefile config.status:1699: creating salome/cfd_study/src/Makefile config.status:1699: creating salome/cfd_study/src/CFDSTUDY/Makefile config.status:1699: creating salome/cfd_study/src/CFDSTUDYGUI/Makefile config.status:1699: creating salome/cfd_study/src/CFDSTUDYOTURNS/Makefile config.status:1699: creating docs/Makefile config.status:1699: creating docs/doxygen/Makefile config.status:1699: creating docs/style/csvers.tex config.status:1699: creating docs/studymanager/Makefile config.status:1699: creating docs/studymanager/graphics/Makefile config.status:1699: creating docs/developer/Makefile config.status:1699: creating docs/developer/graphics/Makefile config.status:1699: creating docs/install/Makefile config.status:1699: creating docs/refcard/Makefile config.status:1699: creating docs/refcard/graphics/Makefile config.status:1699: creating docs/theory/Makefile config.status:1699: creating docs/theory/graphics/Makefile config.status:1699: creating docs/user/Makefile config.status:1699: creating docs/user/graphics/Makefile config.status:1699: creating tests/Makefile config.status:1699: creating extras/salome/fsi_appli_config.xml config.status:1699: creating extras/windows/innosetup/setup_mingw.iss config.status:1699: creating extras/windows/innosetup/setup_cygwin32.iss config.status:1699: creating extras/windows/innosetup/setup_cygwin64.iss config.status:1699: creating bin/cs_config.py config.status:1699: creating cs_config.h config.status:1913: executing depfiles commands config.status:1913: executing libtool commands config.status:1913: executing po-directories commands configure:36844: === configuring in libple (/home/cs-chin1/SOFTWARE/Code_Saturne-5.3.1/code_saturne-5.3.1.build/arch/Linux/libple) configure:36907: running /bin/sh /home/cs-chin1/SOFTWARE/Code_Saturne-5.3.1/code_saturne-5.3.1/libple/configure --disable-option-checking '--prefix=/home/cs-chin1/SOFTWARE/Code_Saturne-5.3.1/code_saturne-5.3.1/arch/Linux' '--disable-mpi-io' '--disable-shared' '--disable-gui' '--with-hdf5=/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/hdf5' '--without-cgns' '--enable-openmp' '--disable-mei' '--without-modules' '--with-med=/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/med' '--with-medcoupling=/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/MEDCOUPLING' '--with-scotch=/home/cs-chin1/SOFTWARE/Scotch/scotch_6.0.3' 'CC=mpicc' 'FC=mpif90' 'CCX=mpicxx' --cache-file=/dev/null --srcdir=/home/cs-chin1/SOFTWARE/Code_Saturne-5.3.1/code_saturne-5.3.1/libple ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-pc-linux-gnu ac_cv_c_compiler_gnu=yes ac_cv_c_const=yes ac_cv_c_inline=inline ac_cv_cxx_compiler_gnu=yes ac_cv_env_BIBTEX_set= ac_cv_env_BIBTEX_value= ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_set=set ac_cv_env_CC_value=mpicc ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CMAKE_set= ac_cv_env_CMAKE_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXCPP_set= ac_cv_env_CXXCPP_value= ac_cv_env_CXXFLAGS_set= ac_cv_env_CXXFLAGS_value= ac_cv_env_CXX_set= ac_cv_env_CXX_value= ac_cv_env_DOT_set= ac_cv_env_DOT_value= ac_cv_env_DOXYGEN_set= ac_cv_env_DOXYGEN_value= ac_cv_env_FCFLAGS_set= ac_cv_env_FCFLAGS_value= ac_cv_env_FC_set=set ac_cv_env_FC_value=mpif90 ac_cv_env_FIG2DEV_set= ac_cv_env_FIG2DEV_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_LRELEASE_set= ac_cv_env_LRELEASE_value= ac_cv_env_LT_SYS_LIBRARY_PATH_set= ac_cv_env_LT_SYS_LIBRARY_PATH_value= ac_cv_env_MAKEINDEX_set= ac_cv_env_MAKEINDEX_value= ac_cv_env_OMNIIDLPYBE_set= ac_cv_env_OMNIIDLPYBE_value= ac_cv_env_OMNIIDL_set= ac_cv_env_OMNIIDL_value= ac_cv_env_PDFLATEX_set= ac_cv_env_PDFLATEX_value= ac_cv_env_PYRCC4_set= ac_cv_env_PYRCC4_value= ac_cv_env_PYRCC5_set= ac_cv_env_PYRCC5_value= ac_cv_env_PYTHON_set= ac_cv_env_PYTHON_value= ac_cv_env_PYUIC4_set= ac_cv_env_PYUIC4_value= ac_cv_env_PYUIC5_set= ac_cv_env_PYUIC5_value= ac_cv_env_SALOMEENVCMD_set= ac_cv_env_SALOMEENVCMD_value= ac_cv_env_SALOMERUN_set= ac_cv_env_SALOMERUN_value= ac_cv_env_SPHINXBUILD_set= ac_cv_env_SPHINXBUILD_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_fc_compiler_gnu=yes ac_cv_fc_libs=' -L/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/hwloc-1.11.7-ffzjos5nb56vx5la4tch7hwlpqdw3qng/lib -L/usr/lib64 -L/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/lib -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib64/../lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib/../lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/lib -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/../../.. -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath -lpthread' ac_cv_func_access=yes ac_cv_func_chdir=yes ac_cv_func_clock_getcpuclockid=yes ac_cv_func_clock_gettime=yes ac_cv_func_dup2=yes ac_cv_func_erf=yes ac_cv_func_getcwd=yes ac_cv_func_geteuid=yes ac_cv_func_getpwuid=yes ac_cv_func_getrusage=yes ac_cv_func_gettimeofday=yes ac_cv_func_memset=yes ac_cv_func_mkdir=yes ac_cv_func_modf=yes ac_cv_func_posix_memalign=yes ac_cv_func_pow=yes ac_cv_func_sbrk=yes ac_cv_func_sleep=yes ac_cv_func_snprintf=yes ac_cv_func_stat=yes ac_cv_func_strtod=yes ac_cv_func_strtok_r=yes ac_cv_func_sysinfo=yes ac_cv_func_tgamma=yes ac_cv_func_uname=yes ac_cv_header_dirent_h=yes ac_cv_header_dlfcn_h=yes ac_cv_header_fcntl_h=yes ac_cv_header_float_h=yes ac_cv_header_freesteam_steam_h=no ac_cv_header_hdf5_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_memory_h=yes ac_cv_header_ptscotch_h=yes ac_cv_header_stdbool_h=yes ac_cv_header_stdc=yes ac_cv_header_stddef_h=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_procfs_h=yes ac_cv_header_sys_resource_h=yes ac_cv_header_sys_signal_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_sysinfo_h=yes ac_cv_header_sys_time_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_sys_utsname_h=yes ac_cv_header_time=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-pc-linux-gnu ac_cv_lib_hdf5___H5Fopen=yes ac_cv_lib_hdf5_shared___H5Fopen=no ac_cv_lib_hdf5_static___H5Fopen=no ac_cv_objext=o ac_cv_path_BIBTEX=/usr/bin/bibtex ac_cv_path_DOT=/usr/bin/dot ac_cv_path_DOXYGEN=/usr/bin/doxygen ac_cv_path_EGREP='/usr/bin/grep -E' ac_cv_path_FGREP='/usr/bin/grep -F' ac_cv_path_FIG2DEV=/usr/bin/fig2dev ac_cv_path_GMSGFMT=/usr/bin/msgfmt ac_cv_path_GREP=/usr/bin/grep ac_cv_path_MAKEINDEX=/usr/bin/makeindex ac_cv_path_MODULECMD=/usr/bin/modulecmd ac_cv_path_MSGFMT=/usr/bin/msgfmt ac_cv_path_MSGMERGE=/usr/bin/msgmerge ac_cv_path_PDFLATEX=/usr/bin/pdflatex ac_cv_path_PYTHON=/usr/bin/python ac_cv_path_SED=/usr/bin/sed ac_cv_path_XGETTEXT=/usr/bin/xgettext ac_cv_path_install='/usr/bin/install -c' ac_cv_path_lt_DD=/usr/bin/dd ac_cv_path_mkdir=/usr/bin/mkdir ac_cv_prog_AWK=gawk ac_cv_prog_CPP='mpicc -E' ac_cv_prog_CXXCPP='g++ -E' ac_cv_prog_ac_ct_AR=ar ac_cv_prog_ac_ct_CC=mpicc ac_cv_prog_ac_ct_CXX=g++ ac_cv_prog_ac_ct_MANIFEST_TOOL=mt ac_cv_prog_ac_ct_OBJDUMP=objdump ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_ac_ct_STRIP=strip ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_cxx_g=yes ac_cv_prog_fc_g=yes ac_cv_prog_fc_v=-v ac_cv_prog_make_make_set=yes ac_cv_sizeof_double=8 ac_cv_sizeof_float=4 ac_cv_sizeof_int=4 ac_cv_sizeof_long=8 ac_cv_sizeof_long_long=8 ac_cv_sizeof_off_t=8 ac_cv_sizeof_short=2 ac_cv_sizeof_void_p=8 ac_cv_sys_file_offset_bits=no ac_cv_sys_largefile_CC=no ac_cv_sys_largefile_source=1 ac_cv_target=x86_64-pc-linux-gnu ac_cv_type__Bool=yes ac_cv_type_int32_t=yes ac_cv_type_int64_t=yes ac_cv_type_long_long=yes ac_cv_type_pid_t=yes ac_cv_type_ptrdiff_t=yes ac_cv_type_size_t=yes ac_cv_type_uint32_t=yes ac_cv_type_uint64_t=yes ac_cv_type_unsigned_long_long=yes acl_cv_hardcode_direct=no acl_cv_hardcode_libdir_flag_spec='${wl}-rpath ${wl}$libdir' acl_cv_hardcode_libdir_separator= acl_cv_hardcode_minus_L=no acl_cv_libext=a acl_cv_libname_spec='lib$name' acl_cv_library_names_spec='$libname$shrext' acl_cv_path_LD='/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/ld -m elf_x86_64' acl_cv_prog_gnu_ld=yes acl_cv_rpath=done acl_cv_shlibext=so acl_cv_wl=-Wl, am_cv_CC_dependencies_compiler_type=gcc3 am_cv_CXX_dependencies_compiler_type=gcc3 am_cv_ar_interface=ar am_cv_make_support_nested_variables=yes am_cv_pathless_PYTHON=python am_cv_prog_cc_c_o=yes am_cv_prog_tar_pax=gnutar am_cv_python_platform=linux2 am_cv_python_pyexecdir='${exec_prefix}/lib64/python2.7/site-packages' am_cv_python_pythondir='${prefix}/lib/python2.7/site-packages' am_cv_python_version=2.7 gt_cv_func_CFLocaleCopyCurrent=no gt_cv_func_CFPreferencesCopyAppValue=no gt_cv_func_gnugettext1_libc=yes lt_cv_ar_at_file=@ lt_cv_deplibs_check_method=pass_all lt_cv_file_magic_cmd='$MAGIC_CMD' lt_cv_file_magic_test_file= lt_cv_ld_reload_flag=-r lt_cv_nm_interface='BSD nm' lt_cv_objdir=.libs lt_cv_path_LD=/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/ld lt_cv_path_LDCXX='/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/ld -m elf_x86_64' lt_cv_path_NM='/usr/bin/nm -B' lt_cv_path_mainfest_tool=no lt_cv_prog_compiler_c_o=yes lt_cv_prog_compiler_c_o_CXX=yes lt_cv_prog_compiler_c_o_FC=yes lt_cv_prog_compiler_pic='-fPIC -DPIC' lt_cv_prog_compiler_pic_CXX='-fPIC -DPIC' lt_cv_prog_compiler_pic_FC=-fPIC lt_cv_prog_compiler_pic_works=yes lt_cv_prog_compiler_pic_works_CXX=yes lt_cv_prog_compiler_pic_works_FC=yes lt_cv_prog_compiler_rtti_exceptions=no lt_cv_prog_compiler_static_works=no lt_cv_prog_compiler_static_works_CXX=yes lt_cv_prog_compiler_static_works_FC=no lt_cv_prog_gnu_ld=yes lt_cv_prog_gnu_ldcxx=yes lt_cv_sharedlib_from_linklib_cmd='printf %s\n' lt_cv_shlibpath_overrides_runpath=no lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(lib.*\)$/ {"\1", (void *) \&\1},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"lib\1", (void *) \&\1},/p'\''' lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\''' lt_cv_sys_global_symbol_to_import= lt_cv_sys_max_cmd_len=3458764513820540925 lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop lt_cv_truncate_bin='/usr/bin/dd bs=4096 count=1' ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} /home/cs-chin1/SOFTWARE/Code_Saturne-5.3.1/code_saturne-5.3.1/build-aux/missing aclocal-1.15' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='$${TAR-tar}' AM_BACKSLASH='\' AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' AM_DEFAULT_VERBOSITY='1' AM_V='$(V)' AR='ar' AS='as' AUTOCONF='${SHELL} /home/cs-chin1/SOFTWARE/Code_Saturne-5.3.1/code_saturne-5.3.1/build-aux/missing autoconf' AUTOHEADER='${SHELL} /home/cs-chin1/SOFTWARE/Code_Saturne-5.3.1/code_saturne-5.3.1/build-aux/missing autoheader' AUTOMAKE='${SHELL} /home/cs-chin1/SOFTWARE/Code_Saturne-5.3.1/code_saturne-5.3.1/build-aux/missing automake-1.15' AWK='gawk' BIBTEX='/usr/bin/bibtex' BLASRUNPATH='' BLAS_CPPFLAGS='' BLAS_LDFLAGS='' BLAS_LIBS='' CALCIUM_LIBS='' CATALYSTRUNPATH='' CATALYST_CPPFLAGS='' CATALYST_CXXFLAGS='' CATALYST_LDFLAGS='' CATALYST_LIBS='' CC='mpicc' CCDEPMODE='depmode=gcc3' CCMRUNPATH='' CCM_CPPFLAGS='' CCM_LDFLAGS='' CCM_LIBS='' CFLAGS='-std=c99 -fms-extensions -funsigned-char -pedantic -W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wstrict-prototypes -Wmissing-prototypes -Wmissing-declarations -Wnested-externs -Wunused -Wfloat-equal -fdiagnostics-color=auto -fopenmp' CFLAGS_DBG='' CFLAGS_HOT='-O3 -fexcess-precision=fast ' CFLAGS_OPT='-funroll-loops -O2 -Wuninitialized -fexcess-precision=fast' CGNSRUNPATH='' CGNS_CPPFLAGS='' CGNS_LDFLAGS='' CGNS_LIBS='' CMAKE='' COOLPROPPYTHONPATH='' COOLPROPRUNPATH='' COOLPROP_CPPFLAGS='' COOLPROP_LDFLAGS='' COOLPROP_LIBS='' CORBA_CXXFLAGS='' CORBA_INCLUDES='' CORBA_LIBS='' CORBA_ROOT='' CPP='mpicc -E' CPPFLAGS=' -D_POSIX_SOURCE -DNDEBUG ' CS_LD='g++' CXX='g++' CXXCPP='g++ -E' CXXDEPMODE='depmode=gcc3' CXXFLAGS='-W -Wall -Wshadow -Wpointer-arith -Wcast-qual -Wcast-align -Wwrite-strings -Wunused -Wfloat-equal -Wmisleading-indentation -Wduplicated-cond -fdiagnostics-color=auto ' CXXFLAGS_DBG='' CXXFLAGS_HOT='-O3' CXXFLAGS_OPT='-funroll-loops -O2 -Wuninitialized' CXXFLAGS_STD='-ansi -funsigned-char' CYGPATH_W='echo' DEFS='-DHAVE_CONFIG_H' DEPDIR='.deps' DLLTOOL='false' DOT='/usr/bin/dot' DOXYGEN='/usr/bin/doxygen' DSYMUTIL='' DUMPBIN='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/usr/bin/grep -E' EOSRUNPATH='' EOS_CPPFLAGS='' EOS_LDFLAGS='' EOS_LIBS='' EXEEXT='' FC='mpif90' FCFLAGS='-x f95-cpp-input -Wall -pedantic-errors -std=f2003 -fdiagnostics-color=auto -fopenmp' FCFLAGS_DBG='' FCFLAGS_HOT='-O2 ' FCFLAGS_OPT='-O' FCLIBS=' -L/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/hwloc-1.11.7-ffzjos5nb56vx5la4tch7hwlpqdw3qng/lib -L/usr/lib64 -L/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/lib -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib64/../lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib/../lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/openmpi-2.1.1-pt4josxctxqhgjpghjemuyi45joyjg4d/lib -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib64 -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-7.2.0-pqn7o2kyhjuskrlaa5dqkkfpy47qcngt/lib -L/usr/local/software/spack/spack-0.11.2/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/gcc-5.4.0-fis24ggupugiobii56fesif2y3qulpdr/bin/../lib/gcc/x86_64-unknown-linux-gnu/5.4.0/../../.. -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lquadmath -lpthread' FCMODEXT='mod' FCMODINCLUDE='-I' FGREP='/usr/bin/grep -F' FIG2DEV='/usr/bin/fig2dev' FREESTEAMRUNPATH='' FREESTEAM_CPPFLAGS='' FREESTEAM_LDFLAGS='' FREESTEAM_LIBS='' GETTEXT_MACRO_VERSION='0.19' GMSGFMT='/usr/bin/msgfmt' GMSGFMT_015='/usr/bin/msgfmt' GREP='/usr/bin/grep' HAVE_BACKEND_FALSE='#' HAVE_BACKEND_TRUE='' HAVE_CALCIUM_FALSE='' HAVE_CALCIUM_TRUE='#' HAVE_CATALYST_FALSE='' HAVE_CATALYST_TRUE='#' HAVE_CCM_FALSE='' HAVE_CCM_TRUE='#' HAVE_CGNS_FALSE='' HAVE_CGNS_TRUE='#' HAVE_COOLPROP_FALSE='' HAVE_COOLPROP_TRUE='#' HAVE_DOXYGEN_FALSE='#' HAVE_DOXYGEN_TRUE='' HAVE_EOS_FALSE='' HAVE_EOS_TRUE='#' HAVE_ESSL_FALSE='' HAVE_ESSL_TRUE='#' HAVE_FREESTEAM_FALSE='' HAVE_FREESTEAM_TRUE='#' HAVE_FRONTEND_FALSE='#' HAVE_FRONTEND_TRUE='' HAVE_GUI_FALSE='' HAVE_GUI_TRUE='#' HAVE_INTERNAL_PLE_FALSE='#' HAVE_INTERNAL_PLE_TRUE='' HAVE_LATEX_FALSE='#' HAVE_LATEX_TRUE='' HAVE_LINK_CXX_FALSE='#' HAVE_LINK_CXX_TRUE='' HAVE_MEDCOUPLING_FALSE='#' HAVE_MEDCOUPLING_TRUE='' HAVE_MED_FALSE='#' HAVE_MED_TRUE='' HAVE_MELISSA_FALSE='' HAVE_MELISSA_TRUE='#' HAVE_MKL_FALSE='' HAVE_MKL_TRUE='#' HAVE_NEPTUNE_CFD='' HAVE_PARAMEDMEM_FALSE='' HAVE_PARAMEDMEM_TRUE='#' HAVE_PETSC_FALSE='' HAVE_PETSC_TRUE='#' HAVE_PLUGINS_FALSE='' HAVE_PLUGINS_TRUE='#' HAVE_PLUGIN_CATALYST_FALSE='' HAVE_PLUGIN_CATALYST_TRUE='#' HAVE_PLUGIN_MEDCOUPLING_FALSE='' HAVE_PLUGIN_MEDCOUPLING_TRUE='#' HAVE_PLUGIN_MELISSA_FALSE='' HAVE_PLUGIN_MELISSA_TRUE='#' HAVE_QT4_FALSE='' HAVE_QT4_TRUE='#' HAVE_QT5_FALSE='' HAVE_QT5_TRUE='#' HAVE_RELOCATABLE_FALSE='' HAVE_RELOCATABLE_TRUE='#' HAVE_SALOME_FALSE='' HAVE_SALOME_GUI_FALSE='' HAVE_SALOME_GUI_TRUE='#' HAVE_SALOME_KERNEL_FALSE='' HAVE_SALOME_KERNEL_TRUE='#' HAVE_SALOME_TRUE='#' HAVE_SPHINX_FALSE='' HAVE_SPHINX_TRUE='#' HAVE_VOFI_FALSE='' HAVE_VOFI_TRUE='#' HDF5RUNPATH='-R/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/hdf5/lib' HDF5_CPPFLAGS='-I/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/hdf5/include' HDF5_CPPFLAGS_MPI='' HDF5_LDFLAGS='-L/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/hdf5/lib' HDF5_LDFLAGS_MPI='' HDF5_LIBS='-lhdf5 ' HDF5_LIBS_MPI='' IDL='' IDLCXXFLAGS='' IDLPYFLAGS='' IDL_CLN_CXX='' IDL_CLN_H='' IDL_CLN_OBJ='' IDL_SRV_CXX='' IDL_SRV_H='' IDL_SRV_OBJ='' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' INTLLIBS='' INTL_MACOSX_LIBS='' LD='/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-4.8.5/binutils-2.28-o2grafl7kmc7a77gz35jitgnefmpnusa/bin/ld -m elf_x86_64' LDFLAGS=' -O -Wl,--allow-multiple-definition -fopenmp ' LDRPATH='-Wl,-rpath -Wl,' LIBICONV='-liconv' LIBINTL='' LIBOBJS='' LIBS='-lz -ldl' LIBTOOL='$(SHELL) $(top_builddir)/libtool' LIPO='' LN_S='ln -s' LRELEASE='' LTLIBICONV='-liconv' LTLIBINTL='' LTLIBOBJS='' LT_SYS_LIBRARY_PATH='' MAINT='#' MAINTAINER_MODE_FALSE='' MAINTAINER_MODE_TRUE='#' MAKEINDEX='/usr/bin/makeindex' MAKEINFO='${SHELL} /home/cs-chin1/SOFTWARE/Code_Saturne-5.3.1/code_saturne-5.3.1/build-aux/missing makeinfo' MANIFEST_TOOL=':' MEDCOUPLINGRUNPATH='-R/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/MEDCOUPLING/lib' MEDCOUPLING_CPPFLAGS='-I/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/MEDCOUPLING/include' MEDCOUPLING_LDFLAGS='-L/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/MEDCOUPLING/lib' MEDCOUPLING_LIBS='-lmedcoupling -linterpkernel -lmedcouplingremapper -lmedloader' MEDRUNPATH='-R/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/med/lib' MED_CPPFLAGS='-I/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/med/include' MED_LDFLAGS='-L/home/cs-chin1/SOFTWARE/Salome/SALOME-8.5.0-UB16.04-SRC/BINARIES-UB16.04/med/lib' MED_LIBS='-lmedC' MELISSARUNPATH='' MELISSA_CPPFLAGS='' MELISSA_LDFLAGS='' MELISSA_LIBS='' METISRUNPATH='' METIS_CPPFLAGS='' METIS_LDFLAGS='' METIS_LIBS='' MKDIR_P='/usr/bin/mkdir -p' MODULECMD='/usr/bin/modulecmd' MPI_CPPFLAGS=' -DOMPI_SKIP_MPICXX' MPI_LDFLAGS='' MPI_LIBS='' MSGFMT='/usr/bin/msgfmt' MSGFMT_015='/usr/bin/msgfmt' MSGMERGE='/usr/bin/msgmerge' NEPTUNE_CFD='' NM='/usr/bin/nm -B' NMEDIT='' OBJDUMP='objdump' OBJEXT='o' OMNIIDL='' OMNIIDLLDLIBPATH='' OMNIIDLPYBE='' OMNIIDLPYTHONPATH='' OMNIORB_CXXFLAGS='' OMNIORB_IDLCXXFLAGS='' OMNIORB_IDLPYFLAGS='' OMNIORB_IDL_CLN_CXX='' OMNIORB_IDL_CLN_H='' OMNIORB_IDL_CLN_OBJ='' OMNIORB_IDL_SRV_CXX='' OMNIORB_IDL_SRV_H='' OMNIORB_IDL_SRV_OBJ='' OMNIORB_IDL_TIE_CXX='' OMNIORB_IDL_TIE_H='' OMNIORB_INCLUDES='' OMNIORB_LIBS='' OMNIORB_ROOT='' OTOOL64='' OTOOL='' PACKAGE='code_saturne' PACKAGE_BUGREPORT='saturne-support@edf.fr' PACKAGE_NAME='code_saturne' PACKAGE_STRING='code_saturne 5.3.1' PACKAGE_TARNAME='code_saturne' PACKAGE_URL='http://code-saturne.org' PACKAGE_VERSION='5.3.1' PATH_SEPARATOR=':' PDFLATEX='/usr/bin/pdflatex' PETSC_CPPFLAGS='' PETSC_LDFLAGS='' PETSC_LIBS='' PLE_CPPFLAGS='' PLE_LDFLAGS='' PLE_LIBS='-lple' POSUB='po' POW_LIB='' PTHREAD_CC='mpicc' PTHREAD_CFLAGS='-pthread' PTHREAD_LIBS='' PYRCC4='' PYRCC5='' PYTHON='/usr/bin/python' PYTHON_EXEC_PREFIX='${exec_prefix}' PYTHON_PLATFORM='linux2' PYTHON_PREFIX='${prefix}' PYTHON_VERSION='2.7' PYUIC4='' PYUIC5='' RANLIB='ranlib' SALOMEENVCMD='' SALOMEPRE='' SALOMERUN='' SALOME_GUI='' SALOME_GUI_CPPFLAGS='' SALOME_GUI_IDL='' SALOME_GUI_LDFLAGS='' SALOME_KERNEL='' SALOME_KERNEL_CPPFLAGS='' SALOME_KERNEL_IDL='' SALOME_KERNEL_LDFLAGS='' SALOME_YACS='/usr' SCOTCHRUNPATH='-R/home/cs-chin1/SOFTWARE/Scotch/scotch_6.0.3/lib' SCOTCH_CPPFLAGS='-I/home/cs-chin1/SOFTWARE/Scotch/scotch_6.0.3/include' SCOTCH_LDFLAGS='-L/home/cs-chin1/SOFTWARE/Scotch/scotch_6.0.3/lib' SCOTCH_LIBS='-lptscotch -lscotch -lm' SED='/usr/bin/sed' SET_MAKE='' SHELL='/bin/sh' SPHINXBUILD='' STRIP='strip' USE_NLS='yes' VERSION='5.3.1' VOFIRUNPATH='' VOFI_CPPFLAGS='' VOFI_LDFLAGS='' VOFI_LIBS='' XGETTEXT='/usr/bin/xgettext' XGETTEXT_015='/usr/bin/xgettext' XGETTEXT_EXTRA_OPTIONS='' ac_ct_AR='ar' ac_ct_CC='mpicc' ac_ct_CXX='g++' ac_ct_DUMPBIN='' ac_ct_FC='' acx_pthread_config='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='#' am__fastdepCC_FALSE='#' am__fastdepCC_TRUE='' am__fastdepCXX_FALSE='#' am__fastdepCXX_TRUE='' am__include='include' am__isrc=' -I$(srcdir)' am__leading_dot='.' am__nodep='_no' am__quote='' am__tar='tar --format=posix -chf - "$$tardir"' am__untar='tar -xf -' bindir='${exec_prefix}/bin' build='x86_64-pc-linux-gnu' build_alias='' build_cpu='x86_64' build_os='linux-gnu' build_vendor='pc' ccversion='5.4.0' cgns_prefix='' coolprop_prefix='check' cs_env_modules='no' cs_have_backend='yes' cs_have_blas='no' cs_have_calcium='' cs_have_catalyst='no' cs_have_ccm='no' cs_have_cgns='no' cs_have_coolprop='no' cs_have_doxygen='yes' cs_have_eos='no' cs_have_freesteam='no' cs_have_frontend='yes' cs_have_gui='no' cs_have_gui_qt4='no' cs_have_gui_qt5='no' cs_have_hdf5='yes' cs_have_latex='yes' cs_have_long_gnum='yes' cs_have_med='yes' cs_have_medcoupling='yes' cs_have_melissa='no' cs_have_metis='no' cs_have_mpi='yes' cs_have_openmp='yes' cs_have_paramedmem='no' cs_have_petsc='no' cs_have_salome_gui='no' cs_have_salome_kernel='no' cs_have_salome_yacs='yes' cs_have_scotch='yes' cs_have_sphinx='no' cs_have_vofi='no' cs_py_have_plugin_catalyst='False' cs_py_have_plugin_medcoupling='False' cs_py_have_plugin_melissa='False' cs_py_have_plugins='False' cs_special_user_link='' cs_src_revision='5.3.1-63ac9a419a' cs_tex_path_end=':' cs_tex_path_sep=':' cs_version='5.3' cs_version_full='5.3.1-63ac9a419a' cs_version_short='5.3' datadir='${datarootdir}' datarootdir='${prefix}/share' debug='no' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' enable_shared='no' eos_prefix='no' exec_prefix='${prefix}' freesteam_prefix='check' hdf5_prefix='' host='x86_64-pc-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='pc' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /home/cs-chin1/SOFTWARE/Code_Saturne-5.3.1/code_saturne-5.3.1/build-aux/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' med_prefix='' metis_prefix='' mkdir_p='$(MKDIR_P)' mpi_bindir='' mpi_libdir='/usr/local/software/spack/develop-290617/spack/opt/spack/linux-rhel7-x86_64/gcc-5.4.0/hwloc-1.11.7-ffzjos5nb56vx5la4tch7hwlpqdw3qng/lib' mpi_prefix='' mpi_type='OpenMPI' oldincludedir='/usr/include' pdfdir='${docdir}' pkgpyexecdir='${pyexecdir}/code_saturne' pkgpythondir='${pythondir}/code_saturne' ple_docdir='${prefix}/share/doc/ple' ple_type='internal' prefix='/home/cs-chin1/SOFTWARE/Code_Saturne-5.3.1/code_saturne-5.3.1/arch/Linux' profile='no' program_transform_name='s,x,x,' psdir='${docdir}' pyexecdir='${exec_prefix}/lib64/python2.7/site-packages' pythondir='${prefix}/lib/python2.7/site-packages' pythonversion='' relocatable='no' runstatedir='${localstatedir}/run' sbindir='${exec_prefix}/sbin' scotch_prefix='' sharedstatedir='${prefix}/com' subdirs=' libple' sysconfdir='${prefix}/etc' target='x86_64-pc-linux-gnu' target_alias='' target_cpu='x86_64' target_os='linux-gnu' target_vendor='pc' vofi_prefix='' win_prefix='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "code_saturne" #define PACKAGE_TARNAME "code_saturne" #define PACKAGE_VERSION "5.3.1" #define PACKAGE_STRING "code_saturne 5.3.1" #define PACKAGE_BUGREPORT "saturne-support@edf.fr" #define PACKAGE_URL "http://code-saturne.org" #define PACKAGE "code_saturne" #define VERSION "5.3.1" #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_DLFCN_H 1 #define LT_OBJDIR ".libs/" #define TIME_WITH_SYS_TIME 1 #define HAVE__BOOL 1 #define HAVE_STDBOOL_H 1 #define HAVE_LONG_LONG 1 #define HAVE_UNSIGNED_LONG_LONG 1 #define HAVE_INT32_T 1 #define HAVE_INT64_T 1 #define HAVE_UINT32_T 1 #define HAVE_UINT64_T 1 #define HAVE_PTRDIFF_T 1 #define SIZEOF_VOID_P 8 #define SIZEOF_SHORT 2 #define SIZEOF_INT 4 #define SIZEOF_LONG 8 #define SIZEOF_LONG_LONG 8 #define SIZEOF_FLOAT 4 #define SIZEOF_DOUBLE 8 #define HAVE_LONG_GNUM 1 #define HAVE_OPENMP 1 #define HAVE_OPENMP_SIMD 1 #define CS_REVISION "5.3.1-63ac9a419a" #define HAVE_DLOPEN 1 #define HAVE_PTHREAD 1 #define HAVE_MPI 1 #define HAVE_MPI_ONE_SIDED 1 #define HAVE_MPI_IN_PLACE 1 #define HAVE_MPI_NEIGHBOR_COLL 1 #define HAVE_MPI_IBARRIER 1 #define HAVE_PTSCOTCH_H 1 #define HAVE_PTSCOTCH 1 #define HAVE_HDF5_H 1 #define HAVE_HDF5 1 #define HAVE_MED 1 #define HAVE_ZLIB 1 #define SIZEOF_Z_OFF_T 8 #define HAVE_MEDCOUPLING 1 #define HAVE_MEDCOUPLING_LOADER 1 #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_UTSNAME_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_DIRENT_H 1 #define HAVE_STDDEF_H 1 #define HAVE_UNISTD_H 1 #define HAVE_FCNTL_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_SIGNAL_H 1 #define HAVE_SYS_PROCFS_H 1 #define HAVE_SYS_SYSINFO_H 1 #define HAVE_SYS_RESOURCE_H 1 #define HAVE_FLOAT_H 1 #define HAVE_STRING_H 1 #define HAVE_SYS_TIME_H 1 #define HAVE_MKDIR 1 #define HAVE_CHDIR 1 #define HAVE_STAT 1 #define HAVE_DUP2 1 #define HAVE_ACCESS 1 #define HAVE_SNPRINTF 1 #define HAVE_GETCWD 1 #define HAVE_SLEEP 1 #define HAVE_GETPWUID 1 #define HAVE_GETEUID 1 #define HAVE_UNAME 1 #define HAVE_CLOCK_GETTIME 1 #define HAVE_CLOCK_GETCPUCLOCKID 1 #define HAVE_GETRUSAGE 1 #define HAVE_GETTIMEOFDAY 1 #define HAVE_SBRK 1 #define HAVE_SYSINFO 1 #define HAVE_POSIX_MEMALIGN 1 #define HAVE_MEMSET 1 #define HAVE_STRTOK_R 1 #define HAVE_POW 1 #define HAVE_MODF 1 #define HAVE_TGAMMA 1 #define HAVE_ERF 1 #define _LARGEFILE_SOURCE 1 #define HAVE_FSEEKO 1 #define SIZEOF_OFF_T 8 #define HAVE_GLIBC_BACKTRACE 1 #define HAVE_SOCKET 1 #define ENABLE_NLS 1 #define HAVE_GETTEXT 1 #define HAVE_DCGETTEXT 1 configure: exit 0